RNA id: XM_043255298.1



Basic Information


Item Value
RNA id XM_043255298.1
length 1271
RNA type mRNA
GC content 0.42
exon number 7
gene id gmfb
representative False

Chromosome Information


Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 14185315 ~ 14188993 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TATATGGGTGAAACGAACTGATCCTAGTACAGCCATTTATGCAAATCCTGGCGCGTTTCGGCTTTCTGATTGGTCGAGCGAGCGTCACGAGACGCGGCACGGTAGAACTCCTGCACTGCTGAGCTCGTGCCGTCTGTGAAAATGagtgAGTCTTTAGTTGTGTGTGAGGTGGATGAAGACCTGGTGAAAAAGTTGCGTGATTTCCGCTTCAGGAAGGAGACTAATAATGCTGCAATCATCATGAAGATTGATAAAGACAAACAGCTGGTGATTCTGGAGGAGGAGCATGAGGATATTTCCCCAGAAGATCTGAAGAACGAGCTACCAGAAAGACAGCCCAGATTTGTAGTCTACAGCTATAAGTACCAGCACGATGATGGGAGAGTGTCCTACCCTTTGTGTTTCATCTTCTCCAGTCCTGTTgGATGCAAACCTGAGCAGCAGATGATGTACGCTGGCAGCAAAAACAAACTGGTACAGACGGTTGAACTGACCAAGGTGTTTGAGATCAGGAACACTGAAGACCTGACTGAGGAGTGGCTCCGAGAGAAACTGGGCTTCTTCCGCTAAGAAAGGACCGAAAAAGCTAACAGTCATGTTTAAAGAGTGACCGAGATGGGACCATCACCTCCAAACGGAGAGAATACCATAGTCCATCTGATAATgtctgtttgtgtatgtttgaatGCTTCTGCCCAAACTCTAAACCCGCCTGTACCAGTTTAAGATGACAGAAATTTGAggtgcaaagaaaagaaaatgtgaaagcAAATTCCACATATACACTAAACAATTCcttggatttttaaaatcattccGCCGTCATCCCTAAGCAGTAACGTATGTACCGGCCTGCATAGGTGGTCCAGGCTTACTGCCATGATAGTTGGATGACATGTTGTGATTTTTATGTCAGCTATCCTTCATGATAGATGACACGGCAACAGTTTGAAACATTGTATTACTCTATAATGTGGCATGTTTTGCCAGTTTTGGTATAAAATCATATGGGTCTTCGTGTAAAGCTCTGATGAGGGCCAGACATTTTCTTcctttgtaatgcattttctaACTTGAATTTGACCaaacatgaattattttgttttgatatcTGTTGAACTGTAACGGTAGGTGAAGAGGACAGAAGTCTTACTGATATTTTTGGGAGAAACCGTTTACTTGTCataaattcattctttttttttgccttttttaaatcTGCGCTCACGGCCTGATAAATCTCAACTAAAGATTAAAATCTGTGAAGACAA

Function


GO:

id name namespace
GO:0005622 intracellular anatomical structure cellular_component
GO:0003779 actin binding molecular_function

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU138492 lncRNA upstream 23995 14031382 ~ 14161320 (+) False G93592
TU138490 lncRNA upstream 23995 14127864 ~ 14161320 (+) False G93592
TU138494 lncRNA upstream 54945 14031382 ~ 14130370 (+) True G93592
TU138649 lncRNA upstream 94083 14090525 ~ 14091232 (+) True G93685
TU138606 lncRNA upstream 234710 13945330 ~ 13950605 (+) True G93659
TU138706 lncRNA downstream 36603 14224983 ~ 14227711 (+) True G93723
TU138719 lncRNA downstream 55028 14243408 ~ 14245542 (+) True G93733
TU138722 lncRNA downstream 60385 14248765 ~ 14249522 (+) True G93736
TU138733 lncRNA downstream 88235 14276615 ~ 14276875 (+) True G93743
TU138738 lncRNA downstream 94389 14282769 ~ 14284777 (+) True G93745
XM_043255945.1 mRNA upstream 169445 14012249 ~ 14015870 (+) True LOC122356869
XM_043255518.1 mRNA upstream 248446 13930623 ~ 13936869 (+) False si:ch211-67f13.7
XM_043255517.1 mRNA upstream 248446 13930625 ~ 13936869 (+) True si:ch211-67f13.7
XM_043255519.1 mRNA upstream 248446 13931018 ~ 13936869 (+) False si:ch211-67f13.7
XM_043255520.1 mRNA upstream 256078 13918198 ~ 13929237 (+) False mfsd2aa
XM_043255297.1 mRNA downstream 2802 14191182 ~ 14196252 (+) True cnih1
XM_043255289.1 mRNA downstream 12470 14200850 ~ 14209385 (+) True LOC122356518
XM_043255290.1 mRNA downstream 12470 14200850 ~ 14209385 (+) False LOC122356518
XM_043256285.1 mRNA downstream 43994 14232374 ~ 14236033 (+) True dmac2l
XM_043256281.1 mRNA downstream 79997 14268377 ~ 14276439 (+) True atl1
TU138522 other upstream 275712 13739607 ~ 13909603 (+) True G93613
XR_006252431.1 other upstream 968558 13216658 ~ 13216757 (+) True LOC122357146
XR_006252318.1 other upstream 1596462 12586886 ~ 12588853 (+) False mgme1
TU138047 other upstream 1610103 12571631 ~ 12575212 (+) True G93296
TU137635 other upstream 2581091 11603697 ~ 11604224 (+) False G92977
XR_006252357.1 other downstream 165736 14354116 ~ 14367135 (+) False frmd6
XR_006252421.1 other downstream 918078 15106458 ~ 15226183 (+) True LOC122357077
XR_006252370.1 other downstream 1066694 15255074 ~ 15275234 (+) False fam135a
XR_006252400.1 other downstream 1107469 15295849 ~ 15314279 (+) False tarbp1
XR_006252368.1 other downstream 1676459 15864839 ~ 15870625 (+) False hps1

Expression Profile