RNA id: TU139572


Basic Information

Item Value
RNA id TU139572
length 933
RNA type TUCP
GC content 0.45
exon number 1
gene id G94324
representative False

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 16515827 ~ 16518826 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCTCAGAATTGCACGTTTATTTCTTAAAGCCTAGCAATTACAGAAGTTCAACTTCTCACGTTTGTTTTAATTCCGTGGAGGAAATAATCTTCCTGGAGAGCACAGAGTGGGCATGAAATTAATACTGCAAATAAAGAAACacgaaaacaacaaaaaaaacacgagACCTGCCAGATGACGGAACCGCTCGACCCAGTTAACTTAGACGTAGGATCCTCTAGAGAAATGTCTTTAACAGGTGAAGTCATTTTTGCAGTGATTGTTCATAGACTTGTGCAATTTTTATACACTATGTAGTTCGGTTAGACGACGCCTAGAACTGTGATTCGCTTTAACTGTTATTGATGTCTGACATGGAACGTCCTGTGAAACATACGGTCCCTTCTGTCCACGGATCTCGCACACTTCTGCTAGTTAGCGTCCCGTCAGAACCAAAGAGCTGTCCGACTCGAACCGAACCGATTACACTACGTTACACGCCGACGATTCGGTACACCGCGTCCGGCCGGAAGAGTAAGCGAACGCTGGCTCTGAATCGCTCGCCTGAGTTCGAGATCCCGCGGGGCGGAATTACCTCGAGTAACCGCTGCATTTATATCCAGATTATCCAGAGAAGCTTGAAGGAGAAGGAGCGTGTCGACGGTGGACATTTCGAAACTGAATTGAGAGACGGTGGAGAGGAACGGCCGCTTTGGCcgagagttttaaaaaataacggTCAGCTTTAAATTGGCGCGCTTAGTTCGCTAGTCTGAAAAAACGTTTTGTAGCGACGGAGAGGATTGTGGGTAACCCTGATGATGAATACTGGGTGTTTGTGAGATATTTCTTTCCCCTtcccaggtttttttttttttcttttctatgttTGTTCCTTCTGTGTAGTAGATTTGTTATGCACTACTCTTTGTATTTGGATGGTTGAACAgtcag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006252311.1 lncRNA upstream 134751 16361672 ~ 16381076 (+) True LOC122356350
TU139569 lncRNA downstream 54 16516813 ~ 16518826 (+) False G94324
TU139619 lncRNA downstream 24426 16541185 ~ 16542938 (+) True G94361
TU139623 lncRNA downstream 41077 16557836 ~ 16558137 (+) True G94365
TU139677 lncRNA downstream 224708 16741467 ~ 16796842 (+) True G94397
TU139793 lncRNA downstream 369325 16886084 ~ 16925137 (+) True G94481
XM_043255674.1 mRNA upstream 123 16488895 ~ 16515704 (+) False cpeb3
XM_043256177.1 mRNA downstream 47549 16564308 ~ 16570793 (+) True mlh1
XM_043256179.1 mRNA downstream 76541 16593300 ~ 16594640 (+) True mrpl14
XM_043255698.1 mRNA downstream 103523 16620282 ~ 16826870 (+) True cdh23
XM_043255699.1 mRNA downstream 103523 16620282 ~ 16826870 (+) False cdh23
XM_043254574.1 mRNA downstream 317531 16834290 ~ 16867531 (+) True smoc2
TU139427 other upstream 611478 15903946 ~ 15904349 (+) False nkx1.2la
TU139358 other upstream 638405 15873444 ~ 15877422 (+) True G94186
TU139356 other upstream 639149 15874271 ~ 15876678 (+) False G94186
XR_006252368.1 other upstream 645202 15864839 ~ 15870625 (+) False hps1
TU139637 other downstream 81022 16597781 ~ 16605383 (+) True G94378
TU139910 other downstream 1043537 17560296 ~ 17575938 (+) False G94564
TU139911 other downstream 1043537 17560296 ~ 17562248 (+) True G94564
TU140175 other downstream 1922414 18439173 ~ 18439583 (+) True G94760
TU140212 other downstream 2020133 18536892 ~ 18537443 (+) True G94789

Expression Profile