RNA id: TU140208



Basic Information


Item Value
RNA id TU140208
length 272
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G94785
representative True

Chromosome Information


Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 18519640 ~ 18519911 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GGGGAGGATTAGAGGCCGAGGGGCATCTGAGGGGCAACAATAGGGCAAAGATCCGGGAGTCAGTGGATAAACAGCCTTCAAAGATCAGGCCTCTTAATGAGACCAAGGGAGGGAGGTTGAGACAAAAATAAAGGCCTGAAATCACTAatacattgttattatttttactttttaaacataaatcaaGTCCTATGATGGACGGTGCAAATAAAATGGATTTGCCTTCTAAATGCATGTACTTGGTGTTACTGTGCATAATTCAACACACATTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU140167 lncRNA upstream 144467 18373563 ~ 18375173 (+) True G94753
TU140164 lncRNA upstream 249037 18263524 ~ 18270603 (+) True G94750
XR_006252355.1 lncRNA upstream 255044 18263308 ~ 18264596 (+) True LOC122356621
TU140151 lncRNA upstream 357360 18161977 ~ 18162280 (+) True G94741
TU140025 lncRNA upstream 629739 17889654 ~ 17889901 (+) True G94637
TU140210 lncRNA downstream 6491 18526402 ~ 18526631 (+) True G94787
TU140197 lncRNA downstream 25441 18545352 ~ 18631718 (+) True G94776
TU140199 lncRNA downstream 25441 18545352 ~ 18631718 (+) False G94776
TU140198 lncRNA downstream 55579 18575490 ~ 18631718 (+) False G94776
TU140243 lncRNA downstream 260490 18780401 ~ 18785449 (+) True G94816
XM_043256068.1 mRNA upstream 148287 18368314 ~ 18371353 (+) True LOC122356945
XM_043255909.1 mRNA upstream 251806 18264627 ~ 18267834 (+) True LOC122356838
XM_043255908.1 mRNA upstream 258360 18260197 ~ 18261280 (+) True LOC122356837
XM_043255690.1 mRNA upstream 393164 18119711 ~ 18126476 (+) False bsdc1
XM_043255004.1 mRNA downstream 224095 18744006 ~ 18771823 (+) False tmem63ba
XM_043255003.1 mRNA downstream 224096 18744007 ~ 18771823 (+) True tmem63ba
XM_043255006.1 mRNA downstream 224096 18744007 ~ 18771823 (+) False tmem63ba
XM_043255005.1 mRNA downstream 224096 18744007 ~ 18771823 (+) False tmem63ba
XM_043254553.1 mRNA downstream 253276 18773187 ~ 18776934 (+) False LOC122356089
TU140175 other upstream 80057 18439173 ~ 18439583 (+) True G94760
TU139910 other upstream 943702 17560296 ~ 17575938 (+) False G94564
TU139911 other upstream 957392 17560296 ~ 17562248 (+) True G94564
TU139637 other upstream 1914257 16597781 ~ 16605383 (+) True G94378
TU139570 other upstream 2000814 16515827 ~ 16518826 (+) True G94324
TU140212 other downstream 16981 18536892 ~ 18537443 (+) True G94789
TU140195 other downstream 25441 18545352 ~ 18631718 (+) False G94776
TU140499 other downstream 636385 19156296 ~ 19162325 (+) False lhcgr
XR_006252404.1 other downstream 1037238 19557149 ~ 19589504 (+) False foxn2a
XR_006252347.1 other downstream 1098101 19618012 ~ 19665614 (+) False LOC122356529

Expression Profile