RNA id: TU141836



Basic Information


Item Value
RNA id TU141836
length 813
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G95936
representative False

Chromosome Information


Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 22296341 ~ 22297227 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


agcactttcaAACGGTTTATTTACAGCCTCTGTCAGTCAGAGAGGAAGCGGTGTACATACAAAATAAGAGCAAACTCCCTGAGTCTTTACAGATGAACAGACGCTCTgcacagacaggaagtgattCTGTGACAGACCCACACCACAGACACTGACATCTACATACAAACACTGCGTGTGGACACAGAGACAGGATCCATAAAAACACGAGACACGGTCAGTTCTGCCGTGAATACAACAAATTCAGGAAGACAGCTGCGGTTCTCCTACAGATGACAGGAGGGATCAGAATGACACTTAAAGACGTCTTGCCCGTCATTCATCTACAGAATATTTACAGTCAAATCCACATACAACAATAATATGGTCAGGAAGATCGGTGTTACTCAGAAAAAGCATGTAAATGAGTGCAGGACAGACTCACACCATCATAATGAATCTTCTGACACACACTGATCATGTGCACTcgtcctcacacacacacacacacacacacacagaggtggGAATGAAGTCCGAGCGAGCGGATGTCAGTGGATCGGTTGTTCTGTATGTGCTGGTGTGATTGTCTATTCTATGTGTGTGATTCATGTCAGTAGATCCTCTCTAGCGCTGAGAGTTCTGCATCTGTCCATTCTGCAGGTTTCCGTCACACTCTTCctcgtcctcctcttcctcgctcACCAGGAACTCCTCGGGCGGCCAGCGCAGCTCCCCGCTCTCCACCTcgccctccgtcggctccaccacgaTCGACGGCAGACGGTCCTTCAGCTTACAGCAGCGCTCGAAGTCTGACGGGTCCGGGAAGAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU141834 lncRNA downstream 51864 22174326 ~ 22244477 (-) True G95934
TU141833 lncRNA downstream 65802 22228184 ~ 22230539 (-) True G95933
XR_006252426.1 lncRNA downstream 153569 22137388 ~ 22142772 (-) True LOC122357128
TU141813 lncRNA downstream 159950 22135936 ~ 22136391 (-) True G95922
TU141782 lncRNA downstream 175899 22114696 ~ 22120442 (-) True G95902
TU141845 lncRNA upstream 6078 22303305 ~ 22303781 (-) True G95941
TU141840 lncRNA upstream 9841 22307068 ~ 22370625 (-) True G95938
TU141853 lncRNA upstream 16429 22313656 ~ 22483219 (-) True G95949
TU141854 lncRNA upstream 16429 22313656 ~ 22315134 (-) False G95949
TU141890 lncRNA upstream 125892 22423119 ~ 22424220 (-) True G95971
XM_043255402.1 mRNA downstream 12695 22254179 ~ 22283646 (-) False zmp:0000000755
XM_043255400.1 mRNA downstream 12699 22254179 ~ 22283642 (-) True zmp:0000000755
XM_043255401.1 mRNA downstream 12705 22254179 ~ 22283636 (-) False zmp:0000000755
XM_043255446.1 mRNA downstream 46028 22231449 ~ 22250313 (-) False klc1b
XM_043255444.1 mRNA downstream 46028 22231449 ~ 22250313 (-) False klc1b
XM_043254650.1 mRNA upstream 20013 22317240 ~ 22323509 (-) True slc30a10
XM_043254651.1 mRNA upstream 29478 22326705 ~ 22329292 (-) True ypel5
XM_043254793.1 mRNA upstream 138021 22435248 ~ 22448011 (-) False LOC122356262
XM_043254794.1 mRNA upstream 188062 22485289 ~ 22489323 (-) True LOC122356263
XM_043254796.1 mRNA upstream 505491 22802718 ~ 22819457 (-) True LOC122356266
XR_006252351.1 other downstream 46028 22232814 ~ 22250313 (-) False klc1b
TU141832 other downstream 57771 22236104 ~ 22238570 (-) True G95932
TU141795 other downstream 139482 22151742 ~ 22156859 (-) True tmem254
TU141794 other downstream 139517 22151742 ~ 22156824 (-) False tmem254
TU141816 other downstream 152371 22138329 ~ 22143970 (-) False LOC122357128
TU141850 other upstream 29483 22326710 ~ 22329260 (-) False ypel5
TU141887 other upstream 74340 22371567 ~ 22438998 (-) True LOC122356262
TU141882 other upstream 81865 22379092 ~ 22443286 (-) False LOC122356262
TU141894 other upstream 123709 22420936 ~ 22422869 (-) True G95972
TU141976 other upstream 524754 22821981 ~ 22823259 (-) True G96036

Expression Profile