RNA id: TU142010



Basic Information


Item Value
RNA id TU142010
length 937
RNA type TUCP
GC content 0.64
exon number 1
gene id G96053
representative True

Chromosome Information


Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 22994037 ~ 22995599 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ccgTTTCCGCGGTTCCGCGCGCGGGGTAGAaggcgggactgaaccaggctgatggtactgccagagtcaaggagggctCTGAACTTCCGTCCATTCAGGCCGACGGGGATTTCCGGTGCGGCGCGGGGAAGCTCCCGGTGGagactgcagcctgccagccacgctctagaggagttggaagcctcttcggttggcatcggctcatctttcacggtcgggaccgccgcccTCTCCATCGGTCGCCGGGTGCCCTCCGCGCGCGTCGCTCcctgggacaccctccggggaaaagatggcgcccgctCCCCGGCCTCTCGACGCTGTgcggcttccgccagctcgaccgcctcaaccaactccatgacgttcttggggtttctcataccgaccgcctggcgataattccgggggagagcccgcaggagccggtctatcaccaccctttccacaatgatggcgggggttggtgtcccgtccaggagccagtgttgcgctagccgagtaagttcggcagcctgggtccttgccggctggcgagactggaagacccactcttggaaggcttgggctgcgcagaccggtgacagaccgaccctgcccaagatttccctctttaggtcgtcgtatacattcgccaggtcggccggcatgctgaaataggcgcgctggggctctcctgacagcagcggggccaACGCCACGTGCCCAATCCCTCCGGTCCCATCCTTCCGTGGTTGCGACGCTCTCGAACATCTCGAGATATATTTCAGGGTCATCGCTGGCGGCCATTTTGGgtagcagctgtgtggcttgcatccggggatcaggcacgacggggcgtggttgagtggcggcgcggagagcagcgagctcctgctcggtctcgttctggcgggtagccaaatgctcgacgatctgttgctggcgaatggaaacc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU142008 lncRNA downstream 94 22994037 ~ 22994569 (-) False G96053
TU142011 lncRNA downstream 94 22994152 ~ 22994569 (-) False G96053
TU141986 lncRNA downstream 160251 22833829 ~ 22834412 (-) True G96044
TU141923 lncRNA downstream 335351 22658667 ~ 22659312 (-) True G95997
TU141921 lncRNA downstream 336759 22657670 ~ 22657904 (-) True G95995
TU142018 lncRNA upstream 10680 23006279 ~ 23007463 (-) True G96060
TU142019 lncRNA upstream 21599 23017198 ~ 23029900 (-) True G96061
TU142099 lncRNA upstream 156606 23152205 ~ 23154495 (-) True G96108
TU142100 lncRNA upstream 156606 23152205 ~ 23154495 (-) False G96108
TU142128 lncRNA upstream 181203 23176802 ~ 23178096 (-) True G96117
XM_043254796.1 mRNA downstream 175206 22802718 ~ 22819457 (-) True LOC122356266
XM_043254794.1 mRNA downstream 505340 22485289 ~ 22489323 (-) True LOC122356263
XM_043254793.1 mRNA downstream 546652 22435248 ~ 22448011 (-) False LOC122356262
XM_043254651.1 mRNA downstream 665371 22326705 ~ 22329292 (-) True ypel5
XM_043254650.1 mRNA downstream 671154 22317240 ~ 22323509 (-) True slc30a10
XM_043254876.1 mRNA upstream 139219 23134818 ~ 23136642 (-) True c1d
XM_043254869.1 mRNA upstream 161503 23157102 ~ 23167091 (-) False LOC122356317
XM_043254868.1 mRNA upstream 161503 23157102 ~ 23167091 (-) True LOC122356317
XM_043254878.1 mRNA upstream 172274 23167873 ~ 23168903 (-) False mrps6
XM_043254877.1 mRNA upstream 172274 23167873 ~ 23168902 (-) True mrps6
TU141976 other downstream 171404 22821981 ~ 22823259 (-) True G96036
TU141977 other downstream 172149 22821981 ~ 22822514 (-) False G96036
TU141882 other downstream 551377 22379092 ~ 22443286 (-) False LOC122356262
TU141887 other downstream 555665 22371567 ~ 22438998 (-) True LOC122356262
TU141894 other downstream 571794 22420936 ~ 22422869 (-) True G95972
XR_006252429.1 other upstream 1274715 24270314 ~ 24270449 (-) True LOC122357144
TU142459 other upstream 1347262 24342861 ~ 24344630 (-) False borcs7
TU142467 other upstream 1403524 24399123 ~ 24403644 (-) False fgf8a

Expression Profile