RNA id: TU142100


Basic Information

Item Value
RNA id TU142100
length 1354
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id G96108
representative False

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 23152205 ~ 23154495 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTGTTCTGAAGAGCCTCTGGTAAAGTGTGTGGGATCTGGTAGTAGATCAGTCCCACTAAAATACCAAAGAAAATGTTGATGAACAATTGGGCATAAGACGTCTGAGGGTTCCTCAAGATGTTTCTAATGGTGCGGCCACTCACCAACATGAGCTGCAACAAGGTGCAGAGTTCATCTATCGATGTTATTCCTGGTTACTCATCTAATGATTCATAGTTAGCTTGCTTCTACATACCTGGTAATAGAAAGGTGTGGCGTACCCAACCCTGTCCCCTTTAGTGACCTCAGAGTCAAGCCCATCTGAAATCTGAGTGAGTCGGTCTTTTACATCGAGGAAATGAGAGGACTTTCTGTAAATTACCGCCAGTGGGTTTTCATTCTCCACCTCCTCATCACTGCTACACTtctctacaaacacacagacacagactgTTAACAAGAGCAGTGCAAACGCTTAgttaccaaaataaaataacaaggATTGTCCATGTGGAGAACCAACGGATGTGATTTGGTCAACGTTGAGGCACAGTCATGCAATACAGTATGCTTATTGGGAAATTTTGTCTTTGATTCATATATTGTCTTTGATCAAATTTGTAGTATAATTAATatgctttatgttttttttaaagaagtctcacccttcagaaatcattctaatctgCTGAgttgctgctcaagaagcatcattattatcagtattgaaaacagttgtgttgcttaatagtttagcattttctttcatgaatagaaaattctaaatcatttatttagaatCTTTAACTCTGAATCAATTGAATGCGTCCTTGCTGAAAAACAGtattaatttcattcaaataataaacCTTCAGCACCCGATTTACTGTTGTGTATTTGAGGACGGATGGTTCCATTTGTGACATCCAGGAAGAAATCTGCCGGGTTGTTGAACGGCTCGCACTTGTAACCTACAACACATGAACGCAAGTTTGAGAACGGCATGACGCATGCACTGATCAGCGGATCACCGCCGATCTTCATTCGAAGTGTCTGTCATTACCCAAGTCCTCAAAGTAGTTAATAGCTTTGCTGGCGGCCCCTGCATAGATGATTTCTCCTTTATTAATGAGTGTGAGGTGGTCGAACTGGCTGAAGATGGAGTAGCGTGGCTGGTGAATGGAGAAGATGACGGTCTTGCCTTTTTTTGTGGTACTTCTGTAGCAGCTCCATGATGGAGCTGGCAGTGTTGGCGTCCAGGCCTGTGGTGGGCTCGTCCAGGAACAGGAGCGAGGGGGACGTGATGAGCTCCATCCCGATGCTGCACCTCTTCTTCTCCCCACCAGAAACACCACGCAAAAACATGGTCCCAATC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU142019 lncRNA downstream 122305 23017198 ~ 23029900 (-) True G96061
TU142018 lncRNA downstream 144742 23006279 ~ 23007463 (-) True G96060
TU142008 lncRNA downstream 157636 22994037 ~ 22994569 (-) False G96053
TU142011 lncRNA downstream 157636 22994152 ~ 22994569 (-) False G96053
TU141986 lncRNA downstream 317793 22833829 ~ 22834412 (-) True G96044
TU142128 lncRNA upstream 22307 23176802 ~ 23178096 (-) True G96117
TU142211 lncRNA upstream 284782 23439277 ~ 23443783 (-) False si:ch211-130h14.4
TU142295 lncRNA upstream 384283 23538778 ~ 23542300 (-) True G96254
TU142315 lncRNA upstream 772836 23927331 ~ 23928060 (-) True G96265
TU142336 lncRNA upstream 888033 24042528 ~ 24067735 (-) True G96279
XM_043254876.1 mRNA downstream 15563 23134818 ~ 23136642 (-) True c1d
XM_043254796.1 mRNA downstream 332748 22802718 ~ 22819457 (-) True LOC122356266
XM_043254794.1 mRNA downstream 662882 22485289 ~ 22489323 (-) True LOC122356263
XM_043254793.1 mRNA downstream 704194 22435248 ~ 22448011 (-) False LOC122356262
XM_043254651.1 mRNA downstream 822913 22326705 ~ 22329292 (-) True ypel5
XM_043254869.1 mRNA upstream 2607 23157102 ~ 23167091 (-) False LOC122356317
XM_043254868.1 mRNA upstream 2607 23157102 ~ 23167091 (-) True LOC122356317
XM_043254878.1 mRNA upstream 13378 23167873 ~ 23168903 (-) False mrps6
XM_043254877.1 mRNA upstream 13378 23167873 ~ 23168902 (-) True mrps6
XM_043254695.1 mRNA upstream 29420 23183915 ~ 23238517 (-) False micu1
TU142010 other downstream 156606 22994663 ~ 22995599 (-) True G96053
TU141976 other downstream 328946 22821981 ~ 22823259 (-) True G96036
TU141977 other downstream 329691 22821981 ~ 22822514 (-) False G96036
TU141882 other downstream 708919 22379092 ~ 22443286 (-) False LOC122356262
XR_006252429.1 other upstream 1115819 24270314 ~ 24270449 (-) True LOC122357144
TU142459 other upstream 1188366 24342861 ~ 24344630 (-) False borcs7
TU142467 other upstream 1244628 24399123 ~ 24403644 (-) False fgf8a

Expression Profile