RNA id: TU142295



Basic Information


Item Value
RNA id TU142295
length 292
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G96254
representative True

Chromosome Information


Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 23538778 ~ 23542300 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ttttttcttactggCTGCCTGATGTCTTCACAGCAATTCCCTTAGAGAAGTCAGTAATTTCTTGGTAGGACTTCTTCCACACAAACTTTGATTTCTCCGCCATTTGGCAGCTCTCGAAAGAGAGATAAATGTCACCTGATTCCTCATCGACACCACATTTGATTTCCTGGGTGCCTTCTGGCAGCGCCTTGATGCACACAGGATCAGACGGGGTTGAAGCCACGCCAATGCCATTGGCGTTCTCTGCCCGCACTCGGAAAACATAAGACTCGGCTGTCTCTAGACCCTTGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU142211 lncRNA downstream 94995 23439277 ~ 23443783 (-) False si:ch211-130h14.4
TU142128 lncRNA downstream 360682 23176802 ~ 23178096 (-) True G96117
TU142099 lncRNA downstream 384283 23152205 ~ 23154495 (-) True G96108
TU142100 lncRNA downstream 384283 23152205 ~ 23154495 (-) False G96108
TU142019 lncRNA downstream 508878 23017198 ~ 23029900 (-) True G96061
TU142315 lncRNA upstream 385031 23927331 ~ 23928060 (-) True G96265
TU142336 lncRNA upstream 500228 24042528 ~ 24067735 (-) True G96279
TU142347 lncRNA upstream 527860 24070160 ~ 24070488 (-) True G96286
TU142361 lncRNA upstream 565133 24107433 ~ 24107818 (-) True G96295
TU142369 lncRNA upstream 708133 24250433 ~ 24250755 (-) True G96301
XM_043254854.1 mRNA downstream 19124 23513815 ~ 23519654 (-) False rnaset2
XM_043254853.1 mRNA downstream 19125 23513815 ~ 23519653 (-) True rnaset2
XM_043254855.1 mRNA downstream 19734 23513815 ~ 23519044 (-) False rnaset2
XM_043256259.1 mRNA downstream 33086 23465789 ~ 23505692 (-) True rps6ka2
XM_043255790.1 mRNA downstream 73927 23447333 ~ 23464851 (-) True sft2d1
XM_043255964.1 mRNA upstream 91416 23633716 ~ 23995593 (-) True csmd1a
XM_043255748.1 mRNA upstream 501336 24043636 ~ 24057904 (-) True angpt2a
XM_043254672.1 mRNA upstream 756635 24298935 ~ 24302415 (-) True LOC122356174
XM_043254701.1 mRNA upstream 768727 24311027 ~ 24313946 (-) True inaa
XM_043255979.1 mRNA upstream 785565 24327865 ~ 24341452 (-) False cnnm2a
TU142010 other downstream 543179 22994663 ~ 22995599 (-) True G96053
TU141976 other downstream 715519 22821981 ~ 22823259 (-) True G96036
TU141977 other downstream 716264 22821981 ~ 22822514 (-) False G96036
TU141882 other downstream 1095492 22379092 ~ 22443286 (-) False LOC122356262
XR_006252429.1 other upstream 728014 24270314 ~ 24270449 (-) True LOC122357144
TU142459 other upstream 800561 24342861 ~ 24344630 (-) False borcs7
TU142467 other upstream 856823 24399123 ~ 24403644 (-) False fgf8a

Expression Profile