RNA id: TU142347



Basic Information


Item Value
RNA id TU142347
length 329
lncRNA type inter_gene
GC content 0.27
exon number 1
gene id G96286
representative True

Chromosome Information


Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 24070160 ~ 24070488 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CTTTTACACCCTACATCTACATTTTGCTCCTCccttatttaattttagatcaAACTTCACACCTGCTCactgttttcttaaaaatgtatatacattcaGCCAAGCCATAATTACCACCTTACaagaaaaactaacattttaaaaatttcaattttaatcCATGTTAAGTGTATcaacaaataatacaataatttacatttacgaaaataataatttatatttagtaagcataagtataaatgaaaatctgAATCTCACAATGTCCAGGGTTGTTTGCATTAGACAAaaccattttatcatttaacgTAATATCTCTCTTTAAAGAGTGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU142336 lncRNA downstream 2425 24042528 ~ 24067735 (-) True G96279
TU142315 lncRNA downstream 142100 23927331 ~ 23928060 (-) True G96265
TU142295 lncRNA downstream 527860 23538778 ~ 23542300 (-) True G96254
TU142211 lncRNA downstream 626377 23439277 ~ 23443783 (-) False si:ch211-130h14.4
TU142128 lncRNA downstream 892064 23176802 ~ 23178096 (-) True G96117
TU142361 lncRNA upstream 36945 24107433 ~ 24107818 (-) True G96295
TU142369 lncRNA upstream 179945 24250433 ~ 24250755 (-) True G96301
TU142371 lncRNA upstream 194180 24264668 ~ 24264917 (-) True G96303
TU142446 lncRNA upstream 204207 24274695 ~ 24282617 (-) True G96329
TU142461 lncRNA upstream 272261 24342749 ~ 24344630 (-) True borcs7
XM_043255748.1 mRNA downstream 12256 24043636 ~ 24057904 (-) True angpt2a
XM_043255964.1 mRNA downstream 74567 23633716 ~ 23995593 (-) True csmd1a
XM_043254854.1 mRNA downstream 550506 23513815 ~ 23519654 (-) False rnaset2
XM_043254853.1 mRNA downstream 550507 23513815 ~ 23519653 (-) True rnaset2
XM_043254855.1 mRNA downstream 551116 23513815 ~ 23519044 (-) False rnaset2
XM_043254672.1 mRNA upstream 228447 24298935 ~ 24302415 (-) True LOC122356174
XM_043254701.1 mRNA upstream 240539 24311027 ~ 24313946 (-) True inaa
XM_043255979.1 mRNA upstream 257377 24327865 ~ 24341452 (-) False cnnm2a
XM_043255978.1 mRNA upstream 257377 24327865 ~ 24341447 (-) True cnnm2a
XM_043255981.1 mRNA upstream 272372 24342860 ~ 24344657 (-) False borcs7
TU142010 other downstream 1074561 22994663 ~ 22995599 (-) True G96053
TU141976 other downstream 1246901 22821981 ~ 22823259 (-) True G96036
TU141977 other downstream 1247646 22821981 ~ 22822514 (-) False G96036
TU141882 other downstream 1626874 22379092 ~ 22443286 (-) False LOC122356262
XR_006252429.1 other upstream 199826 24270314 ~ 24270449 (-) True LOC122357144
TU142459 other upstream 272373 24342861 ~ 24344630 (-) False borcs7
TU142467 other upstream 328635 24399123 ~ 24403644 (-) False fgf8a

Expression Profile