RNA id: TU142446



Basic Information


Item Value
RNA id TU142446
length 258
lncRNA type inter_gene
GC content 0.41
exon number 2
gene id G96329
representative True

Chromosome Information


Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 24274695 ~ 24282617 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TCTGTTTCCACGGCCACCACGTATTCCAAGCGATGATTCAGGCCTGCTTCGGTGTGGgttataagagtgtgtgtgtgtgtgtgtgtgtgtgggcccaCGGTGTTTATTATCAATTCATACAGAGTTATTCAGCGCGCTTTAGGTTTGTGAGTATTcatagtgttatttttacacaaaaatcacattacagtatacattttattaccagTGTGTTGATTATCTCAGTTAACTCAAAGTGTATTTGATCACGGAGCTCAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU142371 lncRNA downstream 9778 24264668 ~ 24264917 (-) True G96303
TU142369 lncRNA downstream 23940 24250433 ~ 24250755 (-) True G96301
TU142361 lncRNA downstream 166877 24107433 ~ 24107818 (-) True G96295
TU142347 lncRNA downstream 204207 24070160 ~ 24070488 (-) True G96286
TU142336 lncRNA downstream 206960 24042528 ~ 24067735 (-) True G96279
TU142461 lncRNA upstream 60132 24342749 ~ 24344630 (-) True borcs7
TU142460 lncRNA upstream 60244 24342861 ~ 24344630 (-) False borcs7
TU142546 lncRNA upstream 323513 24606130 ~ 24606376 (-) True G96411
TU142551 lncRNA upstream 347936 24630553 ~ 24674087 (-) True G96415
TU142552 lncRNA upstream 348808 24631425 ~ 24675946 (-) False G96415
XM_043255748.1 mRNA downstream 216791 24043636 ~ 24057904 (-) True angpt2a
XM_043255964.1 mRNA downstream 279102 23633716 ~ 23995593 (-) True csmd1a
XM_043254854.1 mRNA downstream 755041 23513815 ~ 23519654 (-) False rnaset2
XM_043254672.1 mRNA upstream 16318 24298935 ~ 24302415 (-) True LOC122356174
XM_043254701.1 mRNA upstream 28410 24311027 ~ 24313946 (-) True inaa
XM_043255979.1 mRNA upstream 45248 24327865 ~ 24341452 (-) False cnnm2a
XM_043255978.1 mRNA upstream 45248 24327865 ~ 24341447 (-) True cnnm2a
XM_043255981.1 mRNA upstream 60243 24342860 ~ 24344657 (-) False borcs7
XR_006252429.1 other downstream 4246 24270314 ~ 24270449 (-) True LOC122357144
TU142010 other downstream 1279096 22994663 ~ 22995599 (-) True G96053
TU141976 other downstream 1451436 22821981 ~ 22823259 (-) True G96036
TU141977 other downstream 1452181 22821981 ~ 22822514 (-) False G96036
TU141882 other downstream 1831409 22379092 ~ 22443286 (-) False LOC122356262
TU142459 other upstream 60244 24342861 ~ 24344630 (-) False borcs7
TU142467 other upstream 116506 24399123 ~ 24403644 (-) False fgf8a

Expression Profile