RNA id: TU142467


Basic Information

Item Value
RNA id TU142467
length 1710
RNA type TUCP
GC content 0.41
exon number 3
gene id fgf8a
representative False

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 24399123 ~ 24404715 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGCGCGTGAAGTATGCCAGCCTCGAGTCAGTGATGAAACGTGTCGTGGCGACGTAATAACATAAAGGGCTCTACTTAAGCGTTTAGCAAAGTTTGGCttgaaatgtactttattttaagccacGCGCAGCGCTTTTCTCAATAGCTCCTGATAGCGTTTTCTAAaagccaaaattaaaaatggaatacGCTACGGATACGTTTTCTCTTTTCGATTGCATTTGGcctgttttaaatgattatattggAGCGCGGTTTAATTTAAAGGCCCGTATGAACGAATGATGAAGCAATTTGTGAAGTTATTGATTATATGGTATTTAATTTCTGACAGGTAACCATTCAGTCCCCGCCTAATTTTACACAGCATGTGAGTGAGCAAAGTAAGGTGACGGACCGGGTCAGCCGTAGACTAATCCGGACCTACCAGCTTTACAGTCGAACCAGTGGCAAGCACGTGCAAGTTCTGGCCAACAAGAAAATCAACGCGATGGCCGAGGACGGTGACGCTCATGCCAAACTCATAGTGGAGACGGACACATTTGGGAGTCGAGTTCGAATTAAAGGAGCTGAAACGGGATTCTACATCTGTATGAACAGAAGAGGGAAACTGATTGGCAAGAAAAACGGTCTGGGGAAAGACTGCATCTTCACAGAGATAGTCCTGGAGAACAACTACACAGCTCTACAGAATGTGAAGTATGAAGGCTGGTACATGGCCTTCACACGCAAAGGCAGACCCCGCAAGGGCTCCAAAACCAGGCAACACCAGCGGGAAGTCCACTTCATGAAGAGGCTGCCCAAGGGACACCAAATCGCAGAGCACAGACCCTTTGATTTCATCAACTACCCTTTCAACAGACGGACTAAACGCACCCGCTACTCAGGAGAGCGTTGAAGAGTGAAGCTGGAGAAAAGGAGaggacagagagcgagagacattCTCAAACAATGAACAGACTCCTCTTGTGGACTcctacaaacattttttgtactGAGCAACAATATACCTAACCTTtagttttttatgaattttcagaaatagcaaaaaaaaagaaaaaaaaaacatctcgagaaaaaaaaagagatctaTTTTTGTACCCCTGACTTTTAGTACTGACCTGTGTAAGAGTATAGAAATGAAAGCACGGGACGTGTAAGTGCTGACATTTTAGTAGTACGTGGACTTCATCCGTCTATCCTCTCTTGATCTGCtttggttttatttgatttcaatGGTTTCAGAGTAATTTATAACTCTTCGTATTGCTGCTCAAGGGGACTTGAAGGGCCTGAGAGAATGCACTGACAACACAAGGCTGTATTCGGTTACACAGGCAGCCAGGGCACCTCTCGACCACCCAGCGATAAGATACCCAGCTCATCTCTCAGTAACCTCTCTGGTTCTTGATTCTGGAACTCTCTGGAGATAAACACGGTTAAAGCAAACAGAgctttaaatacatatttaaatgtggcagctacatttttttattatcgcAGGTTTCCTACTGtgatttaaactgtaaatttCCAAGGTGTATAAATGCATTGTACGGACTGTAGGAAAagctttttgttctttgttgcattttgtttgtctgtttttttatacaaatataaatatatttttatttgaggatgtgtaaaataattttaatgatggaaatatttatttaaaaacctgtAATAAATTTACCTTAGGATACCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU142461 lncRNA downstream 54493 24342749 ~ 24344630 (-) True borcs7
TU142460 lncRNA downstream 54493 24342861 ~ 24344630 (-) False borcs7
TU142446 lncRNA downstream 116506 24274695 ~ 24282617 (-) True G96329
TU142371 lncRNA downstream 134206 24264668 ~ 24264917 (-) True G96303
TU142369 lncRNA downstream 148368 24250433 ~ 24250755 (-) True G96301
TU142546 lncRNA upstream 202486 24606130 ~ 24606376 (-) True G96411
TU142551 lncRNA upstream 226909 24630553 ~ 24674087 (-) True G96415
TU142552 lncRNA upstream 227781 24631425 ~ 24675946 (-) False G96415
XR_006252418.1 lncRNA upstream 249283 24652927 ~ 24664925 (-) True LOC122357044
TU142568 lncRNA upstream 251137 24654781 ~ 24664886 (-) False LOC122357044
XM_043255809.1 mRNA downstream 5236 24367927 ~ 24393887 (-) True fbxw4
XM_043255382.1 mRNA downstream 37827 24350847 ~ 24361296 (-) False wbp1la
XM_043255383.1 mRNA downstream 40882 24350847 ~ 24358241 (-) True wbp1la
XM_043255981.1 mRNA downstream 54466 24342860 ~ 24344657 (-) False borcs7
XM_043255980.1 mRNA downstream 54466 24342860 ~ 24344657 (-) False borcs7
XM_043255913.1 mRNA upstream 26376 24430020 ~ 24441333 (-) True slc2a15a
XM_043254739.1 mRNA upstream 200044 24603688 ~ 24620433 (-) True b3gat2
XM_043254555.1 mRNA upstream 263661 24667305 ~ 24672334 (-) False asrgl1
XM_043254554.1 mRNA upstream 263661 24667305 ~ 24672195 (-) True asrgl1
XM_043254579.1 mRNA upstream 438626 24842270 ~ 24845635 (-) True cgasa
TU142459 other downstream 54493 24342861 ~ 24344630 (-) False borcs7
XR_006252429.1 other downstream 128674 24270314 ~ 24270449 (-) True LOC122357144
TU142010 other downstream 1403524 22994663 ~ 22995599 (-) True G96053
TU141976 other downstream 1575864 22821981 ~ 22823259 (-) True G96036
TU141977 other downstream 1576609 22821981 ~ 22822514 (-) False G96036

Expression Profile