RNA id: TU142546



Basic Information


Item Value
RNA id TU142546
length 247
lncRNA type intronic
GC content 0.36
exon number 1
gene id G96411
representative True

Chromosome Information


Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 24606130 ~ 24606376 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TATCCATTTAACAAGAGTTCGGCACACATTGCAATAATGACAGTGGTATCTCCAGCACACTTGTCTTACAATTTTCTAATAGATACAAATGCAAAGACTAAGACTGCTCCAAGATTAGTCCAAAAAGTATGAAgggtttaaattttaataacttttttcttgAAACTAATTTACAATTACTAGAGCCCACGAGGACTGCTGGTTTCAGACCTCCACACTCATGTTATATCACCGTTTTCAACCTTTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU142461 lncRNA downstream 261500 24342749 ~ 24344630 (-) True borcs7
TU142460 lncRNA downstream 261500 24342861 ~ 24344630 (-) False borcs7
TU142446 lncRNA downstream 323513 24274695 ~ 24282617 (-) True G96329
TU142371 lncRNA downstream 341213 24264668 ~ 24264917 (-) True G96303
TU142369 lncRNA downstream 355375 24250433 ~ 24250755 (-) True G96301
TU142551 lncRNA upstream 24177 24630553 ~ 24674087 (-) True G96415
TU142552 lncRNA upstream 25049 24631425 ~ 24675946 (-) False G96415
XR_006252418.1 lncRNA upstream 46551 24652927 ~ 24664925 (-) True LOC122357044
TU142568 lncRNA upstream 48405 24654781 ~ 24664886 (-) False LOC122357044
TU142578 lncRNA upstream 104368 24710744 ~ 24713458 (-) True G96435
XM_043255913.1 mRNA downstream 164797 24430020 ~ 24441333 (-) True slc2a15a
XM_043254715.1 mRNA downstream 201415 24399126 ~ 24404715 (-) True fgf8a
XM_043255809.1 mRNA downstream 212243 24367927 ~ 24393887 (-) True fbxw4
XM_043255382.1 mRNA downstream 244834 24350847 ~ 24361296 (-) False wbp1la
XM_043255383.1 mRNA downstream 247889 24350847 ~ 24358241 (-) True wbp1la
XM_043254555.1 mRNA upstream 60929 24667305 ~ 24672334 (-) False asrgl1
XM_043254554.1 mRNA upstream 60929 24667305 ~ 24672195 (-) True asrgl1
XM_043254579.1 mRNA upstream 235894 24842270 ~ 24845635 (-) True cgasa
XM_043255511.1 mRNA upstream 240073 24846449 ~ 24851300 (-) True eef1a1a
XM_043255512.1 mRNA upstream 240073 24846449 ~ 24851238 (-) False eef1a1a
TU142467 other downstream 202486 24399123 ~ 24403644 (-) False fgf8a
TU142459 other downstream 261500 24342861 ~ 24344630 (-) False borcs7
XR_006252429.1 other downstream 335681 24270314 ~ 24270449 (-) True LOC122357144
TU142010 other downstream 1610531 22994663 ~ 22995599 (-) True G96053
TU141976 other downstream 1782871 22821981 ~ 22823259 (-) True G96036

Expression Profile