RNA id: XM_043254555.1


Basic Information

Item Value
RNA id XM_043254555.1
length 1056
RNA type mRNA
GC content 0.51
exon number 7
gene id asrgl1
representative False

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 24667305 ~ 24672334 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTTTATTTGTTGTCCCTGTTACACCATCTACAGGTTCGTTCGGTTTTTTTCTGCACATGTGCTATCCGTGTTTGCGTATTCTTGTCGTTAGTCGTTAATCTGTATTATTCTCAATCAAGTATTTGTGGACGGCTATGCTGCCTGTAGTGGTGGTGCACGGAGGCGCTGGTCATGTTCCCAAAGAAAGAGCTGAACTCTCTACTATTGGTGTAAAGGAGGCAGTCAGGACTGGGTATGCCATCCTCCAGAAAGGTGGAAGTGCCATGGATGCTGTGGTTGAAGCAGTGGCCCTGATGGAGAACAACCCGAGATTCAATGCAGGTCGGGGATCAGTGCTAAATGTGAATGGGGAGGTGGAGATGGATGCAATTGTAATGGATGGCAGGACTCTAGAAAGTGGAGCTGTTTCAGCGGTCCGAAGAATTGCTAACCCAGTGCAACTTGCCAGGCTCGTCATGGAGAAGACCACACACTTGTGTCTGACAGCTGAAGGGGCCTCTAAGTTTGCCAGAAGCATGGGTGTACCGGAAGTGCCTGAGGAGTCATTGATCACAGACTATGCCAAGATGCGCTGGAAGAAGAATCTGCAGCCAGATGCCAACCCTGTGGAATGCCAAATGGGCAAGATGGGAACAGTTGGTGCCGTAGCTGTGGACAAAGACGGGAACATTGCTTGTGCCACATCCACTGGtggaatgataaataaaatggagGGTCGTGTGGGAGACACTCCGTGTGTTGGGTGTGGGGGCTATGCAGATAACAATATTGGGGCCGTCTCACCCACAGGCCATGGGGAAGCTATCATGAAGGTCACGCTGTCTAGACTCATTCTCTTCCACATGGAGCAAGGCAAGACCCCAGAGGAAGCTGGTGACCTGGCCCTTACGTATATGAAGGAGCGAGTGAATGGTCTTGGTGGGGTGGTGGTGGTAGATCCAAAAGGAACCTGGGCAGCTCGGTTCAGCAGTTTACAGATGTCATGGGCCGCTGCCCAGCAGGGCGAACTCCACCATGGACTAAATCGTGGCGAACACTTTGTTGAGCCtgtataaa

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0033345 asparagine catabolic process via L-aspartate biological_process
GO:0005737 cytoplasm cellular_component
GO:0003948 N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity molecular_function
GO:0008798 beta-aspartyl-peptidase activity molecular_function
GO:0004067 asparaginase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006252418.1 lncRNA downstream 2380 24652927 ~ 24664925 (-) True LOC122357044
TU142568 lncRNA downstream 2419 24654781 ~ 24664886 (-) False LOC122357044
TU142546 lncRNA downstream 60929 24606130 ~ 24606376 (-) True G96411
TU142461 lncRNA downstream 322675 24342749 ~ 24344630 (-) True borcs7
TU142460 lncRNA downstream 322675 24342861 ~ 24344630 (-) False borcs7
TU142578 lncRNA upstream 38410 24710744 ~ 24713458 (-) True G96435
TU142582 lncRNA upstream 41885 24714219 ~ 24716962 (-) True G96436
XM_043254739.1 mRNA downstream 46872 24603688 ~ 24620433 (-) True b3gat2
XM_043255913.1 mRNA downstream 225972 24430020 ~ 24441333 (-) True slc2a15a
XM_043254715.1 mRNA downstream 262590 24399126 ~ 24404715 (-) True fgf8a
XM_043255809.1 mRNA downstream 273418 24367927 ~ 24393887 (-) True fbxw4
XM_043255382.1 mRNA downstream 306009 24350847 ~ 24361296 (-) False wbp1la
XM_043254579.1 mRNA upstream 169936 24842270 ~ 24845635 (-) True cgasa
XM_043255511.1 mRNA upstream 174115 24846449 ~ 24851300 (-) True eef1a1a
XM_043255512.1 mRNA upstream 174115 24846449 ~ 24851238 (-) False eef1a1a
XM_043255513.1 mRNA upstream 174115 24846449 ~ 24851217 (-) False eef1a1a
XM_043255516.1 mRNA upstream 179069 24851403 ~ 24856234 (-) False slc17a5
TU142467 other downstream 263661 24399123 ~ 24403644 (-) False fgf8a
TU142459 other downstream 322675 24342861 ~ 24344630 (-) False borcs7
XR_006252429.1 other downstream 396856 24270314 ~ 24270449 (-) True LOC122357144
TU142010 other downstream 1671706 22994663 ~ 22995599 (-) True G96053
TU141977 other downstream 1844791 22821981 ~ 22822514 (-) False G96036

Expression Profile