RNA id: XM_043254582.1


Basic Information

Item Value
RNA id XM_043254582.1
length 3013
RNA type mRNA
GC content 0.46
exon number 15
gene id cdc25b
representative True

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 5252901 ~ 5259209 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCAGAGTTTGGAAAGGTCAGAGAGAGTGCATCTAATCGGCAGCTCTCTGACAACAAATATCTAAGAATATGGATTTTTAAAcaccctccttttttttttaatcgtgtCTTGTGTAATCTGGCGTAGTAGTTATGCAGAATTCTGCAAGTTGTTTTCTCAACGCTAAATAAGATCAATTTAAGCCGCTTGCTAACTTGGCTTAACCCTTTGTCGTCTTAATCGCGCCTGACTGGATTTTATTTTCAATCATTCAATCATCCGAAGACCCGCGTCCCTTCAGAAATGGATTTTGTCATCTCTCCAGGCGACATCAGCCCTGTGAGCGATCCGTTCAGCGCCGGGCCCGATGCAGTCCTCCGACCTCCGCGGCTCTCCTTGCCGGAGATCGGAGCGAGGGGCTCCCCCTGCGCGAGCCTGGCCTCCCCCGGACCCATGGCGGTGCTGTCTCCTGTGACCAACCTGGCTCTAAACATGAATAACCTCGCTGTTCTCGGAGGTCAATGTGAGACGCCAAAGCGGAAGAAAAACCTGCCCCTCCTGAAGATCCCTTCCTTCGCCTCTGATGCTTCTTCAGATGCAGGTCTCGGACTAGAGTCACCCAGCCCTTTGGATGCTCTGGATGCTGAGCAGAAGTTCGAGAAGGCCATGCAGGATGCCACACGAGCAGTTAATGAAAAAATGCCCATTCGCAGGATACACTCTTTGCCACTGCAATGTTTGGGTCACAGTCCCAATTTGAGAAATAAAGAACCAGATCCGTCGCGCTATGGAGTGTGGACTTGTGCGAATAGCAGCGACAACAAAGAGAACCTGGCTgaggAGAATTTTGAGTTCAAGAAGCCTTCCATGCCAGCATCACGCTGTCGTACGCGGTCTGCTGGAGGCACCAAGGATGCTTTTGCCGGCCGACCCAACTCTGCTCCTGCTTTAATGCTTTCCCCACCTTCATCCCAGCAGCCTGACTCCTCAGACGAGATCAGTCCCTTTATATTGCGCCGCCCTTCTCTCTCCTGTCTccatgacgatgatgatgatgatggcttCTTAGAGGGGCTGGATGATGTCGAGAATGATTCGGAGGTTCCTCTTGGGATGGACAGTCTTCTCACAGCTCCTCTGGTGGCTAAACAAAGTACTGACAGTAATTATTCGCCTGTTGTTCGTTGCCGCCCGCGTGGTTTGTTTCGATCTCCCTCTATGCCGAACCCCGGAGGGCGTATCCCGCTCAAGAGACCTGAGAGGCCGCAAGATGAAAACACACCTGTCAGAGTGAAGAGGAGGCGGAGCCTGGCGGGGACACAAGTTGCACCCACAGAACAAGACGATGTTATACCTCATCAGGTTCAAAGGTCAAAGTCATTTAATCACACCCAGATTGAAAGAATGTTGGATACAGATCCCAGTAATGTGACTGGAGATTTCACCAAGgcTCCTGCACTACCCACAGTTGATGGAAAACACCAAGAGTTGAAATACATCACTCCAGAAATTatgGTTAATGCAATGAAAGGCCAGTACAGCGATCTGGTGGAGAGGCTGTTTGTCATCGACTGCCGTTATCCGTCCGAGTACGAGGGCGGCCATATTAAGGGTGCCCTTAACTTCCATCAAGAGGATCAAATTGAAGACTACTTTTTAAAGAGTCCTATTCTCCCCGAATGTCCCGAGAAGCGTGTCCTGCTGGTTTTCCACTGTGAATTCTCATCTGAACGTGGCCCACGGATGTGCCGCTTTGTTCGACAAAGAGATCGATTTTTGAACGAGTACCCCAACCTCCATTACCCTGAACTCTATATCCTGAAGGGAGGTTACAAAGACTTTTTCCCACTTCACAAGTCGGTCTGTGAACCGCAGGCTTACAGGCCGATGCATCATGAAGACTTTAAAGAAGACCTGAGGAAGTTCCGCCTTAAGAGCCGCACCTGGGCTGGAGAACGCAGCAAGAGAGACATGTACAGCCGTCTCAAAAATCTTTGAGCCTCGCGTTCCCTCTCCACCGTACTGCCGTTACTCGCTCAGATGCTGCCCTCACACATGACCTGAAGACGTGTGTTTGATGGGAACAGCTGTTGGTTTTCAGGGTTTGGTATTTCTGTTGTACCGCAGAGTCAAATGAGGTTGAGAGGCTATTATGCATCTCTGCCTGTTTGGTTCGatctttataattataatttttttttttttttttaaactgccaTTATTCACCACCCTGGTCTCCCTTGAGAAACACACAGCTACATGTCACTGTCATGTATTAAGTATACACGTTTTAACTCGCctgtatctttttctttttttatttaatttttttttttttttttactcccaGGTTTTTGGCCATTGGCTTGTCCTAACTTGTATGTTGGATAAATTAGTGACTATTTTACCTTGCTCCCCGTTCCCCTTGAGCACTTcccctttttttaattgttgtggTGATTACGTGATTTATGCATTCGTTTTGCCTCCCTTTCTCACATCTGGTCAGTTGCCCAATAGTAAAGCTGTGATTGCAGCCAGAGGACGGATTACATTGTATAAAttggtttatatattttgaatatcaCAATTATGCAAATTCTCATAATcgcaaaataatgactttaaatCTTGACCTGTTTGTTTTGGCAATTACTATATTGCTTCGAGTGTCCTGGTTTGCGTTTTTTGGACATCGAGCGTTCTTTTAGGGGGAGctagcaataatattttattttaattttttttttttccctcacttGGCTGACAGCTTTAACTCGGGGACGGGATCCTGAATTTTTCTGCTGCTGGTCAGCAAGTGATGACCACAATGTTCACCAAAATGTTCCGAAACGAGATCTAGTTCTATTTGTCTGTACACCAGTGACAGTTGAGAGTTGCAAATCTCCCGTGCAAGgtgtgttttgtatatttttacctTCCTGAGTGTGTTTTATTGGTCATGTGTGACTGAGAGGCTGGTGTATGCATTCATTAATAAACTTGGAGTTTGGGGTAACAGCTCTTTGCTCAA

Function

GO:

id name namespace
GO:0009794 regulation of mitotic cell cycle, embryonic biological_process
GO:0000087 mitotic M phase biological_process
GO:0006470 protein dephosphorylation biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0004725 protein tyrosine phosphatase activity molecular_function

KEGG:

id description
K05866 CDC25B; M-phase inducer phosphatase 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU134670 lncRNA upstream 74880 5177718 ~ 5178021 (+) False rab11fip5a
TU134605 lncRNA upstream 216785 5035359 ~ 5036116 (+) True G90905
TU134562 lncRNA upstream 239239 5003410 ~ 5013662 (+) True G90879
TU134586 lncRNA upstream 287886 4964702 ~ 4965015 (+) True G90888
TU134323 lncRNA upstream 557059 4625603 ~ 4695842 (+) False si:ch211-250c4.5
TU134687 lncRNA downstream 11392 5270601 ~ 5271199 (+) False ap5s1
TU134692 lncRNA downstream 138286 5397495 ~ 5435571 (+) False G90957
TU134690 lncRNA downstream 174373 5433582 ~ 5435571 (+) True G90957
TU134737 lncRNA downstream 242433 5501642 ~ 5505510 (+) True G90985
TU134758 lncRNA downstream 264536 5523745 ~ 5525112 (+) True G90997
XM_043255102.1 mRNA upstream 40037 5198874 ~ 5212864 (+) True sfxn5a
XM_043255101.1 mRNA upstream 40388 5198875 ~ 5212513 (+) False sfxn5a
XM_043255100.1 mRNA upstream 40388 5198878 ~ 5212513 (+) False sfxn5a
XM_043255099.1 mRNA upstream 40388 5198882 ~ 5212513 (+) False sfxn5a
XM_043255098.1 mRNA upstream 54497 5177731 ~ 5198404 (+) False rab11fip5a
XM_043256127.1 mRNA downstream 1827 5261036 ~ 5271247 (+) False ap5s1
XM_043256126.1 mRNA downstream 1828 5261037 ~ 5264887 (+) True ap5s1
XM_043256276.1 mRNA downstream 85317 5344526 ~ 5431348 (+) False gfra4a
XM_043256275.1 mRNA downstream 85319 5344528 ~ 5431348 (+) True gfra4a
XM_043254888.1 mRNA downstream 308293 5567502 ~ 5574433 (+) True ky
TU134595 other upstream 255005 4992327 ~ 4997896 (+) False si:ch73-49p17.1
TU134239 other upstream 1008860 4182499 ~ 4244041 (+) False G90660
TU134245 other upstream 1008860 4182499 ~ 4244041 (+) False G90660
TU134242 other upstream 1008860 4241132 ~ 4244041 (+) True G90660
unassigned_transcript_1924 other upstream 1181002 4071806 ~ 4071899 (+) True trnai-uau_4
unassigned_transcript_1926 other downstream 1872217 7131426 ~ 7131496 (+) True trnag-gcc_68
TU135767 other downstream 2576981 7836190 ~ 7838941 (+) False chchd1
XR_006252298.1 other downstream 2599489 7858698 ~ 7881483 (+) False zswim8
TU135961 other downstream 3047277 8306486 ~ 8310824 (+) True G91833
XR_006252358.1 other downstream 3407059 8666268 ~ 8683052 (+) False pcnx2

Expression Profile