RNA id: XM_043254600.1


Basic Information

Item Value
RNA id XM_043254600.1
length 3272
RNA type mRNA
GC content 0.50
exon number 3
gene id LOC122356122
representative True

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 4016033 ~ 4022400 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ttaactgtattttataatgcaaaaatgtattaaaaataataattgctaaAGAGCTGTGGCGTTATGAAGATTGCGCGAGATGCTAAAGTGGACTCTCATCACAAGCGTCTCCTGTAATCTGTGGGTAGACGGCAGAACATCGAGAGGAGAGACCTGAGAGTACTTCTGGAgccgtgcgtgcgtgcgtgtgcgcgcACGCATAACATCACCGTTCGCGCCTGGTGCATCGCTCGCAGGTCGGGATTGATTCGGTGCGTCGCGGAAACCAAAGTGCCCTCGCGATGCCGCGTGCGTTGAGTGGAGATCGGCGGGGCGCAGCCGACGCGCAGGTACAGGCGCACCGCGAGCGCGCGAGTTCTCTCCAAACCGAAGACGCCGAGAGGAACGGCGTTATCTCCGGCCGCTTCCCACGCCGCGTGGTGGACACTTGAAGAAGGGGGAAGCGTGAACTTTGAGCGCCGAAGCCGGGGAGCGTTTGCCGCGACCCGCCGAACATGACTTTCATCTGCGCTCCAGGATTTCAAAGTTCGCAAAAATGAAGTTCGGCAAAAGCGTCTGTATCTTAAACGTGGGTGGCACCAAGTACGCTTTTCCAAAGGACGTAATCAAGGATTTCCCTTTGAGGAGAGTGAGTCGTCTCCACAGTTGCGCCTCGGAGAGAGAAGTGCTGGAAGTGTGCGATGATTACGAAGAGAGGAACGAGTTCTTCTTTGACAGGCATTCAGAAGCGTTCGGCTTCATCATGCTGTACGTGAAGTACGGCAAGCTGCGCTTCGTCCCGCATATGTGCGAGCTGTCGTTTTACAACGAGATGATCTACTGGGGGCTGGAGAGCTCTCATCTGGAGTTCTGCTGCCAGCGGAGGCTCGACGACCGTATGTCCGACACGTACACTCACTTCACCGAGGAGCACCACAGAGCGGCCGACGACTCGAGGACGGACGCGTCCTCGAACGGGAAGCGGGACTCGAAGTGGCTGGAGCGAATGCGCAGGACTTTCGAGGAGCCCACCTCCTCCCTGGCCGCGCAAATTTTGGCGTCCGTGTCGGtgatttttgtcattgtgtCCATGGTGATACTTTGCGCGAGCACTCTTCCTGACTGGAAAACTGCCGAGAGCAACATGGTGGAAGAGCACAGGATCATTGAGGCGGTGTGCATCGGATGGTTCACGGCAGAGTGCATCGTGCGCTTCATTGTGTCTCGAGACAAGTGTGAGTTTGTGCGACGCCCGCTGAACATCATAGACCTGCTGGCCATTACCCCCTATTACATCTCTGTCACCATGACGGTTCTGACCGGAGAAAACTCTCAGCTGCAGAGGGCCGGCGTGACGCTGAGAGTGCTACGCATGATGCGAATCTTCTGGGTCATCAAGCTAGCGCGACACTTCCTAGGGCTCCAGACTTTAGGGTTAACGCTGAAGCGCTGCTACCGTGAGATGGTCATGCTCCTGGTCTTCATTTGCGTGGCCATGGCCATATTCGGAGCGCTGGCGCAACTTCTAGAGCACGGTCTGGATCTGGAGTCCGGGAATGAGGAATACGCTAGCATTCCTGCCGCCTGCTGGTGGGTTATTATCTCCATGACCACTGTCGGCTATGGAGACATGTACCCCATCACTGTGCCGGGACGTGTGCTTGGTGGCCTGTGCGTCGTGAGCGGAATAGTGCTGCTGGCTCTTCCCATCACCTTCATCTACCACAGCTTTGTGCAGTGCTACCACGAACTCAAGTTCCGCTCGGCTCGCTGCACCCGAAGCCTGTCCGCAGAGTTCCTCAACTGACTCTTTCTCTAGCTTCCCGCTAAAGAAATCAACGGTTGGCGCAAAGGTCTCCATCTGCCGTGTTCGTCTCCAGATCAGCGCCGCCGAGCTCCAGTATGCGCTGTATCTGTTACTCAAGGGGCTGGAGGAGGCTGCCATGGTGACGGTATCACTAAGGCCAGGTGTCCTTGACAGGAGGGAAACTTTCAGAGGCCTTGAAAAGACTCAAGCCCCGGCTCTCTCAGAGATCTGTTCATTACCTTATACGTGTGGCGTTCCTCCAAAGGATTTCGCTTTTGAATGCCACTTAGGCAGCCCACAGTGTTGGCAAGAAGATACGAGAGAAATAATTGAATCATCTTGTCGCCCAGGAACCTTTCTCTTTGATGATGCCTTCATTTATAAGCAATGAAGTTTTAAAGCAGTACCACTTTtccagcatttaaaatattgagagcctcttttttcttttcttttttttttttttaaaggacaatagattacaaaaacatgaattttaatCAATCTGTTCCACTTTCTGCATACTCTTTCCAGGCTAAATTGTTGTGTAGACTCAATTCAGTGTGACAGCAAACCTCCAGAGGTAGTGGGACATAATGAGCGGAATAGACTGAGAATTACAAGGATAAAGTGAGAGCTGTGTGGGCAGCTATGCTGAGAGGAACATAACATGCCATGGAGAGAGAGTGCTGTCATGGAGAGTCGGGTGTTTTGGATGACACCAAGCAGAGCGCGTAGAGTTCTCCCCAATCTTCTACCTATGAATGTCCTCTACCGCTCTGCCAGTTTTCACACGGGATTGAGATGCCTTGAGGCTTGTGCACCCTTGGAGCTGCTCAGAAAGCAAGGTTCTGGAGATCTTTAGTGACACAGCTACCTCAAGGCCATCTCCTCCCATGGAGTCACCCATGACACCCACTTCTCCCCGACTCACTGCTGTCTCTATGTTGTTGTGGCTCTTATGTTCCTTAATGCTCTTAAGGGAACATAGAGAGAATGTGCCGTTATCTGGGTTTTTTGTCTCAACGCATTTCTTTATGTGCATCATGGGAGGGCCGCTGctaaaggaaatgaaaaaactGTGTGTAAAATTGTGACAAAAGAGTTATTTGATGTcaaaaaagcatgtaaataatgttggcctgtttacatttttaaatggaggCCAGTAGTTAGGGAAAAGTCATTAGGAATATCGACCCTGTTTATTTTCTTGGGGCACATTCATCTGTGCATATTATTCCAGATTCCCAAAAAGTCTTAACAATTTGATCCAccaatttgatttttttgtttgcttttgctttcaaaTCCTCCCTTTCAACCACCTAGTCCATTATGGTTCCCAATATCAGATATAAAAAGGTCCTATGCTAGATTTTCCTCACTGAATATGCTGTTGTTTTACACGTGTAAATATTCAGAGCACAGAAGTAAAACAGATTCATGttgaaacattttgcattttagaaatctgcatcatttt

Function

GO: NA

KEGG:

id description
K04902 KCNG3, KV6.3; potassium voltage-gated channel subfamily G member 3

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU134176 lncRNA downstream 2032 4010173 ~ 4014001 (-) True G90633
TU134171 lncRNA downstream 60096 3951763 ~ 3955937 (-) True wu:fj16a03
TU134172 lncRNA downstream 64436 3945108 ~ 3951597 (-) True G90629
TU134175 lncRNA downstream 71769 3943873 ~ 3944264 (-) True G90632
TU134174 lncRNA downstream 72328 3943460 ~ 3943705 (-) True G90631
TU134189 lncRNA upstream 30738 4053138 ~ 4053386 (-) False hcar1-3
XR_006252372.1 lncRNA upstream 316442 4338842 ~ 4347524 (-) True LOC122356721
XR_006252373.1 lncRNA upstream 316442 4338842 ~ 4342720 (-) False LOC122356721
XR_006252374.1 lncRNA upstream 316442 4338842 ~ 4342687 (-) False LOC122356721
TU134375 lncRNA upstream 367955 4390355 ~ 4413771 (-) True G90750
XM_043255556.1 mRNA downstream 60078 3952597 ~ 3955955 (-) False wu:fj16a03
XM_043256122.1 mRNA downstream 251432 3761833 ~ 3764601 (-) True prph2b
XM_043255850.1 mRNA downstream 472357 3482958 ~ 3543676 (-) True qkib
XM_043255375.1 mRNA downstream 548976 3454742 ~ 3467057 (-) True LOC122356548
XM_043255507.1 mRNA downstream 582495 3426588 ~ 3433538 (-) False timm23b
XM_043255866.1 mRNA upstream 30343 4052743 ~ 4055413 (-) True hcar1-3
XM_043256321.1 mRNA upstream 40072 4062472 ~ 4067606 (-) True haao
XM_043256157.1 mRNA upstream 219127 4241527 ~ 4244433 (-) True LOC122357001
XM_043256156.1 mRNA upstream 223331 4245731 ~ 4325475 (-) False thada
XM_043256155.1 mRNA upstream 223331 4245731 ~ 4325475 (-) False thada
TU133931 other downstream 994171 2990418 ~ 3021862 (-) True G90445
TU133704 other downstream 1388876 2626328 ~ 2627157 (-) True G90311
TU133689 other downstream 1430702 2584196 ~ 2585331 (-) True G90304
TU133469 other downstream 1770955 2151837 ~ 2245078 (-) True G90161
TU133318 other downstream 2324098 1684449 ~ 1691935 (-) True LOC122356758
XR_006252267.1 other upstream 650566 4672966 ~ 4689168 (-) False LOC122356061
XR_006252269.1 other upstream 650566 4672966 ~ 4689168 (-) False LOC122356061
XR_006252268.1 other upstream 650566 4672966 ~ 4689168 (-) False LOC122356061
XR_006252266.1 other upstream 650566 4672966 ~ 4689168 (-) False LOC122356061
XR_006252265.1 other upstream 650566 4672966 ~ 4689168 (-) False LOC122356061

Expression Profile