RNA id: XM_043254628.1


Basic Information

Item Value
RNA id XM_043254628.1
length 2747
RNA type mRNA
GC content 0.44
exon number 4
gene id bag3
representative True

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 9451180 ~ 9456908 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTCCGCTAGAACTTTCTCGGTAGTCTTCAGAGGGACCTTGCTGCTTCGAGAAACCCGTCCCAGTTTACGGTACGTCATCAAACGGACCCTTTAAAGCGTCTGTAGCGGCTGTAATGGCACAATATTCGGGAGCGAAGCAATACCAGAGTATGAAAACACTGTCTCCAGTCGAAACGATGGCAACTAACGATCCTCTGCCACCCGGGTGGGAGATCAAAATCGACCCGCAGACAGGTTGGCCGTTTTTTGTGGATCACAACAATCGCACAACGACGTGGAATGATCCGAGGCATGACACGAAAAAGgtttTTCCAAATGGCCCATCTATGTCCCCTGAGTCTCCTCAGGACATGCACAAATCCTTTATTCAGGAGATGAGGCAACCAATGCTACGCCAAGGCTACATCCCCATCCCAGTCTCCCATGAAAACACTGAACCCAGGCTGCAGCAGTATCCGAGTTTCTCCTACATCTACCCGTCAGCGCAGCAAAGTTTGAGAACAGACGGACGTACACCTTCTCCGACCCCAGCATCCCACTGTCGGCCTAGATCTCCAGTGCAGGCCCCATCGGAAGCATGTTTGTCTTGCTCACCTGCTTCACACGGGCCTGAGGTTCATCAACCACAGGGCTCACACCAACAAATAAGTGGCCTTCATCAGCAGCCTCGACCCAGCAATACAGGTCTTCGGGCGGGCTACATCCCCATTCCGGTGATCCACGAGGGTGTAGGGGGCATCTCACAATCTCAACCGAGCCAAAGTTCTCATCCCACACGAGAAAAAATGCCAATCTACCGTGAACAAGTGCCCATTCAGATTCAACAGAATCGAGCTGCCAGTCCCATCTCGGTCCCCTTACTGGCCCAGTCACCAGTCATGTCTCAGATCATGGGAGAGAGACCCCAGGTCCAGCAACACATTGGACACGCACCGATATCACCTAAAGCTGAACAACCATTTGAAGAAATTGTCAGAGCGCCTGCATTTGAGATTCCTGTTCAAAGAGTTGGTGATGTTCCTCCGCAAATACATCACCAGCCAGTACAGCTGCAACAACAACCTACACAAGCACCTCAGCCAAAAGCACAACAACCCATACCGCAGTCACCGCAGGTATCAGAGACATCCAATATTACCATACAGTTTCCTCCAGCACCAGAACCCCAGGAAGCCGCTGGCCCTCAAACACCTCAAGAGGTCCTACCCCCACATGTCCAGCCTGAGGAGACTCCAGAACAAGATCTGAGCCACCCAGGACTGATCAAAGTGCAGCAGATATTGGAACGTGTGGAGAAACTGGCACAAGATGTGAAAAGCTTTGATGGGAAGAAGAATGATAAAAGATACTTGATGCTGGAAGAGATGTTGACCAAAGAACTTCTGGCTCTGGACTCGGTAGACCCTGAAGGTCGCCCAGATGTGCGTCAGGCTCGGAGGGATGGCGTCCGCAGAGTTCAAACCATTCTAGATGAACTGGAGATGTTTGGAGAGCCGATGGATGGGCTGGCTGGTGACACGTACCCTCAGGCGAAAGGAGAGCGGAGTATGATTGACCaggcaaacacagagaaggTCAAGGAGATTTCATAATTGCACAAAGAAGGCACACATTTGAGAAGAACACTAATCAAATCCCCATTCTTGTTTTTACTCGCGCAATTATTATTAGTTGCATGCATGAATAATTGAAGTTTTCTGTTGGAAATGATCTAACGTGATTTGTTTACCGAGTGCAATCATGTGTGCTGTTATGTGATGCTGCTGTTGTCGAATCTCACCATGCCAGTGTCTTGTAGCAAAAGACATAGTGGTGACAAGTTATATTCAAAAACACATGTAAACGAGGCCTTGAACcagaagaaagtattttaacgTTCAAAAAGTATCTTTTGTAccatgtgaatgaatgaatggtaaaatgtttttgaatattcCTTAAGAAGTTGTTTATGAAGTAGTGGGATGTCATagtgaaaacttttatttgattttttaaaaatttatgtGTGGGCTACAAAAAATCTAAaggcattcattttaattttggcatATGGGAAAGTATTCATGCCTTTTAAATATAACCATTTCAACATCATGCGGGAGAATAATTCAGTGTTGGGAGTGAGCTTTGCTGACAGAATACCCTATGATGGTTTGAGTGCTTGTcggtattattatttgttgaatgATAGTGATAAAAatgatgatatatttttattctatttttctgtgccaaaatgaacatttccaGTATTAAGAATATTCACTTAAGAATGTTCATttgttaaatctaaaaaaaaaaacttactcaATATATGGTCGCCTTATGATTAAGGGGCTGGTTTGTTAAAGCAGCCAGGGTCAGTCCAAAGTTATGGTGATCTATGAACTCAAAAGGTACCAAAATCATCCCATTGTATTAACATTGTGCCCTTGAGGAAGGCAGCTTGCCCTAGGGGATTAGAAATTAGTGAACCAAAAACGACTTTGTATAATGTGTCAGCTCAATTCAGTTTAAAACTAAGTGCTGTGTCTCACATGACTGTtgtgagactttttttttatcttaatgaCCTGTTACTGACTCTGATATCGTACTAATACTGCGAACAAAACTGGTTTCTAAGTCTGTTTTGTGAAATAGTATGCAATGTTCAGTGTTCACAGCTTGGTTATTTGCAGTTGACATGATATGGTGACATAAGCATGACtgcaaatacaatataataaagcaCTTTGCTTACA

Function

GO:

id name namespace
GO:0060047 heart contraction biological_process
GO:0051087 chaperone binding molecular_function

KEGG:

id description
K09557 BAG3; BCL2-associated athanogene 3

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU136646 lncRNA upstream 491 9450446 ~ 9450689 (+) True G92313
TU136465 lncRNA upstream 16584 9430178 ~ 9434596 (+) False atoh7
TU136467 lncRNA upstream 16584 9430178 ~ 9434596 (+) False atoh7
TU136420 lncRNA upstream 175481 9264064 ~ 9275699 (+) True G92147
TU136362 lncRNA upstream 306669 9140217 ~ 9144511 (+) True G92111
TU136670 lncRNA downstream 22513 9479421 ~ 9479752 (+) True G92334
TU136663 lncRNA downstream 114081 9570989 ~ 9583070 (+) True LOC122356835
XR_006252391.1 lncRNA downstream 125647 9582555 ~ 9583671 (+) False LOC122356835
XR_006252390.1 lncRNA downstream 125723 9582631 ~ 9583671 (+) False LOC122356835
TU136704 lncRNA downstream 135511 9592419 ~ 9594277 (+) True G92361
XM_043254627.1 mRNA upstream 7472 9436681 ~ 9443708 (+) True pkd2l1
XM_043254742.1 mRNA upstream 16575 9430203 ~ 9434605 (+) True atoh7
XM_043254743.1 mRNA upstream 16575 9430203 ~ 9434605 (+) False atoh7
XM_043254744.1 mRNA upstream 19578 9430178 ~ 9431602 (+) False atoh7
XM_043254745.1 mRNA upstream 19578 9430200 ~ 9431602 (+) False atoh7
XM_043255348.1 mRNA downstream 649 9457557 ~ 9473534 (+) True inpp5f
XM_043255349.1 mRNA downstream 649 9457557 ~ 9473534 (+) False inpp5f
XM_043255352.1 mRNA downstream 651 9457559 ~ 9473534 (+) False inpp5f
XM_043255351.1 mRNA downstream 652 9457560 ~ 9473534 (+) False inpp5f
XM_043255353.1 mRNA downstream 1758 9458666 ~ 9473534 (+) False inpp5f
TU136388 other upstream 287066 9161561 ~ 9164114 (+) True zgc:153981
TU136262 other upstream 711091 8739073 ~ 8740089 (+) False sf3b5
XR_006252358.1 other upstream 768128 8666268 ~ 8683052 (+) False pcnx2
TU135961 other upstream 1140356 8306486 ~ 8310824 (+) True G91833
XR_006252298.1 other upstream 1569697 7858698 ~ 7881483 (+) False zswim8
TU136946 other downstream 779008 10235916 ~ 10249725 (+) False LOC122356813
XR_006252428.1 other downstream 872236 10329144 ~ 10329279 (+) True LOC122357143
XR_006252423.1 other downstream 961914 10418822 ~ 10419594 (+) False ly6pge
TU137252 other downstream 1507965 10964873 ~ 10968914 (+) True eif4ebp2
TU137332 other downstream 1756618 11213526 ~ 11215087 (+) False G92772

Expression Profile