Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043254653.1 |
| length | 972 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 3 |
| gene id | sfr1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056711.1 |
| NCBI id | CM032080.1 |
| chromosome length | 25085836 |
| location | 9116205 ~ 9117372 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0000724 | double-strand break repair via homologous recombination | biological_process |
| GO:0032798 | Swi5-Sfr1 complex | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU136575 | lncRNA | downstream | 2045 | 9113737 ~ 9114160 (-) | True | G92266 |
| TU136574 | lncRNA | downstream | 2907 | 9112907 ~ 9113298 (-) | True | G92265 |
| TU136573 | lncRNA | downstream | 3616 | 9112295 ~ 9112589 (-) | True | G92264 |
| TU136572 | lncRNA | downstream | 7844 | 9108070 ~ 9108361 (-) | True | G92263 |
| TU136557 | lncRNA | downstream | 93998 | 9021810 ~ 9022207 (-) | True | G92251 |
| TU136582 | lncRNA | upstream | 2881 | 9120253 ~ 9120479 (-) | True | G92270 |
| TU136583 | lncRNA | upstream | 4748 | 9122120 ~ 9122350 (-) | True | G92271 |
| TU136586 | lncRNA | upstream | 9188 | 9126560 ~ 9126858 (-) | True | G92274 |
| TU136588 | lncRNA | upstream | 15727 | 9133099 ~ 9133475 (-) | True | G92276 |
| TU136589 | lncRNA | upstream | 16780 | 9134152 ~ 9134485 (-) | True | G92277 |
| XM_043255566.1 | mRNA | downstream | 13501 | 9095701 ~ 9102704 (-) | False | erlin1 |
| XM_043255565.1 | mRNA | downstream | 13522 | 9095701 ~ 9102683 (-) | False | erlin1 |
| XM_043255568.1 | mRNA | downstream | 13525 | 9095701 ~ 9102680 (-) | False | erlin1 |
| XM_043255567.1 | mRNA | downstream | 13554 | 9095701 ~ 9102651 (-) | True | erlin1 |
| XM_043256069.1 | mRNA | downstream | 43869 | 9069481 ~ 9072336 (-) | True | znf511 |
| XM_043256252.1 | mRNA | upstream | 20117 | 9137489 ~ 9158550 (-) | False | slka |
| XM_043256251.1 | mRNA | upstream | 20117 | 9137489 ~ 9158550 (-) | True | slka |
| XM_043256253.1 | mRNA | upstream | 20117 | 9137489 ~ 9158549 (-) | False | slka |
| XM_043254665.1 | mRNA | upstream | 57551 | 9174923 ~ 9203419 (-) | False | kat6b |
| XM_043254664.1 | mRNA | upstream | 57551 | 9174923 ~ 9203419 (-) | True | kat6b |
| TU136576 | other | downstream | 654 | 9115093 ~ 9115551 (-) | True | G92267 |
| TU135889 | other | downstream | 1068304 | 8043565 ~ 8047901 (-) | True | G91775 |
| unassigned_transcript_1927 | other | downstream | 1981063 | 7135072 ~ 7135142 (-) | True | trnag-gcc_69 |
| unassigned_transcript_1925 | other | downstream | 1984990 | 7131145 ~ 7131215 (-) | True | trnag-gcc_67 |
| TU135441 | other | downstream | 2725490 | 6358201 ~ 6390715 (-) | False | sdccag8 |
| TU136940 | other | upstream | 1068389 | 10185761 ~ 10190510 (-) | False | LOC122356841 |
| TU137394 | other | upstream | 1807572 | 10924944 ~ 10935331 (-) | True | G92819 |
| XR_006252282.1 | other | upstream | 2083574 | 11200946 ~ 11218985 (-) | False | rassf4a |
| XR_006252349.1 | other | upstream | 2408808 | 11526180 ~ 11531309 (-) | False | zdhhc16a |
| XR_006252352.1 | other | upstream | 2654056 | 11771428 ~ 11799032 (-) | False | utp25 |
