Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043254663.1 |
| length | 942 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 3 |
| gene id | mxtx1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056711.1 |
| NCBI id | CM032080.1 |
| chromosome length | 25085836 |
| location | 7793836 ~ 7795601 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0001757 | somite specification | biological_process |
| GO:0035050 | embryonic heart tube development | biological_process |
| GO:0045893 | positive regulation of transcription, DNA-templated | biological_process |
| GO:0030335 | positive regulation of cell migration | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| id | description |
|---|---|
| K24896 | DUX; double homeobox protein |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_006252306.1 | lncRNA | downstream | 748261 | 7017223 ~ 7045575 (-) | True | LOC122356287 |
| TU135614 | lncRNA | downstream | 913942 | 6879222 ~ 6879894 (-) | True | G91574 |
| TU135536 | lncRNA | downstream | 1006229 | 6787267 ~ 6787607 (-) | True | G91513 |
| XR_006252424.1 | lncRNA | downstream | 1089913 | 6693662 ~ 6703923 (-) | True | LOC122357105 |
| TU135512 | lncRNA | downstream | 1106541 | 6687077 ~ 6687295 (-) | True | G91490 |
| TU135810 | lncRNA | upstream | 14259 | 7809860 ~ 7810104 (-) | False | si:dkey-191g9.7 |
| TU135853 | lncRNA | upstream | 183219 | 7978820 ~ 7980706 (-) | True | G91758 |
| TU135856 | lncRNA | upstream | 188345 | 7983946 ~ 7984316 (-) | True | G91760 |
| TU135882 | lncRNA | upstream | 202079 | 7997680 ~ 8041218 (-) | True | G91769 |
| TU135912 | lncRNA | upstream | 335642 | 8131243 ~ 8131848 (-) | True | G91796 |
| XM_043255337.1 | mRNA | downstream | 2972 | 7783638 ~ 7790864 (-) | False | tspan14 |
| XM_043255338.1 | mRNA | downstream | 3217 | 7783638 ~ 7790619 (-) | True | tspan14 |
| XM_043256417.1 | mRNA | downstream | 418674 | 7372444 ~ 7375162 (-) | True | si:ch1073-126c3.2 |
| XM_043256418.1 | mRNA | downstream | 418710 | 7372444 ~ 7375126 (-) | False | si:ch1073-126c3.2 |
| XM_043256320.1 | mRNA | downstream | 431826 | 7301181 ~ 7362010 (-) | False | gfra1a |
| XM_043256016.1 | mRNA | upstream | 2909 | 7798510 ~ 7802178 (-) | True | elovl6l |
| XM_043256017.1 | mRNA | upstream | 10975 | 7806576 ~ 7809315 (-) | True | sprn |
| XM_043256391.1 | mRNA | upstream | 14248 | 7809849 ~ 7816379 (-) | False | si:dkey-191g9.7 |
| XM_043256390.1 | mRNA | upstream | 14248 | 7809849 ~ 7816379 (-) | True | si:dkey-191g9.7 |
| XM_043254608.1 | mRNA | upstream | 23142 | 7818743 ~ 7829212 (-) | True | si:dkey-191g9.5 |
| unassigned_transcript_1927 | other | downstream | 658694 | 7135072 ~ 7135142 (-) | True | trnag-gcc_69 |
| unassigned_transcript_1925 | other | downstream | 662621 | 7131145 ~ 7131215 (-) | True | trnag-gcc_67 |
| TU135441 | other | downstream | 1403121 | 6358201 ~ 6390715 (-) | False | sdccag8 |
| TU135397 | other | downstream | 1568103 | 6225261 ~ 6225733 (-) | False | LOC122356805 |
| XR_006252265.1 | other | downstream | 3104668 | 4672966 ~ 4689168 (-) | False | LOC122356061 |
| TU135889 | other | upstream | 247964 | 8043565 ~ 8047901 (-) | True | G91775 |
| TU136576 | other | upstream | 1319492 | 9115093 ~ 9115551 (-) | True | G92267 |
| TU136940 | other | upstream | 2390160 | 10185761 ~ 10190510 (-) | False | LOC122356841 |
| TU137394 | other | upstream | 3129343 | 10924944 ~ 10935331 (-) | True | G92819 |
| XR_006252282.1 | other | upstream | 3405345 | 11200946 ~ 11218985 (-) | False | rassf4a |
