RNA id: XM_043254687.1


Basic Information

Item Value
RNA id XM_043254687.1
length 1663
RNA type mRNA
GC content 0.49
exon number 15
gene id dcdc2b
representative False

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 12423676 ~ 12429124 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCGCGAGAGGGAGGGAGTGAGGTGTTTGAGTCTCTCACACTCAGTGCTTTAATATTAGAAACATACACGAAAAATAATCAGTACCAATAACAGACCAGGTGTATGTTAATGTGGCTAGTTTTGGGTCATGGCATCTACTGGTGTCACTAATCACCTGCCTCCAGTCAAGAGTGTGATGGTCTACAGAAATGGAGACCCCTTCTTTTCAGGAAGGAGATTTGTTGTAAACCAGAGGCAAGTCTCCACCATGGATGCATTCCTTAATGACATCACTCTCAGTATCAGAGCTCCGTTGGCTGTTCGAACTCTCTATACACCACGCTATGGTCATCGGGTCGCAGACCTTGGTGACCTACAGCAAGGGGCACAGTATGTGGCGGCAGGGTTTGAGCGCTTTAAGAAACTAGATTATCTGACTGCAGGACTGAAGAAAGGTCCACTGTGCAGAGTTATGGAACCAGCCCAGGTTAAAGCACTTGTGAGGCCTAATGTGTCTGCAAAATGGAGAAAGGCCATCACTCTGCCCTGCATTATAAATGTATTTAGGAATGGCGACATCCTCAGTCCTGCCATGCGTCTGATCATTCCCCGCCACATGCAGAAACATCTAGAGCAGATCCTGAGCCTCATTTCTGAAAAAGCCATGCTTCGCACAGGAGCAGTGCGCAGGCTTTGTACTCTGGAGGGTTTTACGGTGACCTCCACAGAGGAGCTGGAGAACGGGCAAAGCTATGTAGCCGTGGGAACAGAGAGGTTCAAAAAGCTTCCCTATGTGGAGATACTGCTGAACAAGGCAACAGGCAACAGTGCGGACAGACATTATGCTGGAGACAGAGGATTACAGAGAAGAATTGAGGACAGCCACAGTGACTCCACCCTGATGAATTCACCTGAGAGGCAAGGCAGGCGTGTGAAGTCCACAGGAGATGAGGTTGAGCGAGCAAGCTCCCCTCAGCCGGTTAAGAGGAGAGGaaggagaggagaaagagaggagaactCTGTTTTCTACGCCAGACCTGTGAGAGTCCGCAGACACCCTCCCACAAACAGAGCCCATCCTAGAGGCGAGATAGATGAGCCCAGTGTGTTTAAGGCCTCTGAGAGCAGGATAAGGGAGGAAGTTCGTGGTGCTGAGGAGGTGGCAGAGGATGAAAATACAGCAGTAGAGCTTCCCATTGACCAGAAAGAAGCAGAAGTTGTAGAGGATGAAGAGCTTCTTGAAAGGGATCAGTTTGATACAGCCAATATAAATCACAGGGATTCAGGTGAATTACACAGGCCATCATCTGATCTCTCCATTGAGAATGGAGAGAAAGAGTTTAGAACATCTGAGAGGGAGACATGGAACGACACGTCAGCTCCACAGAGAGAAGCACATCGAGGATATACGTCCAGCAATGGGTTTCAGCATGatacaaacaaacatgatgCAGAGACACCCACAGAGCATTCCAGatcttcttcatcatcttcatcatccaaAGTCTCTGAACATTCCCCACGAAGTGAAGTAATACAGCAAGAACCAACTGGGAGTTCCCACGAGGAACAGACAGACAGGGATGCTGACAGACCTCTCCAGGCTGAAGATGATGcaggagacagagacacacCTTCACAATCCACACACCTTCTCTGAACGCGGAGTTCACTGTCAAACTGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU138003 lncRNA upstream 38058 12385307 ~ 12385618 (+) True G93267
TU137945 lncRNA upstream 42825 12379709 ~ 12380851 (+) True G93219
TU137949 lncRNA upstream 49545 12363065 ~ 12374131 (+) True G93222
TU137921 lncRNA upstream 156610 12202742 ~ 12267066 (+) True G93200
TU137907 lncRNA upstream 234638 12186068 ~ 12189038 (+) True G93190
TU137947 lncRNA downstream 2825 12431949 ~ 12436643 (+) False LOC122357045
TU138024 lncRNA downstream 19250 12448374 ~ 12450446 (+) True G93280
TU138036 lncRNA downstream 104861 12533985 ~ 12535064 (+) False jag2a
TU138044 lncRNA downstream 139360 12568484 ~ 12569100 (+) True G93295
TU138033 lncRNA downstream 166798 12595922 ~ 12597301 (+) True G93285
XM_043254530.1 mRNA upstream 332 12420615 ~ 12423344 (+) True iqcc
XM_043254529.1 mRNA upstream 3207 12414868 ~ 12420469 (+) True ccdc28b
XM_043255919.1 mRNA upstream 9407 12406911 ~ 12414269 (+) False tmem39b
XM_043255918.1 mRNA upstream 9407 12407921 ~ 12414269 (+) True tmem39b
XM_043255922.1 mRNA upstream 22068 12399664 ~ 12401608 (+) True oip5
XM_043256226.1 mRNA downstream 2795 12431919 ~ 12436577 (+) False LOC122357045
XM_043256225.1 mRNA downstream 3826 12432950 ~ 12436577 (+) True LOC122357045
XM_043255844.1 mRNA downstream 21447 12450571 ~ 12485662 (+) True brf1a
XM_043255843.1 mRNA downstream 22519 12451643 ~ 12485662 (+) False brf1a
XM_043256343.1 mRNA downstream 59457 12488581 ~ 12493739 (+) True LOC122357113
TU137630 other upstream 818824 11603697 ~ 11604852 (+) True G92977
TU137635 other upstream 819452 11603697 ~ 11604224 (+) False G92977
TU137640 other upstream 845817 11571660 ~ 11577859 (+) False lrrc9
TU137330 other upstream 1205501 11215492 ~ 11218175 (+) True G92772
TU137332 other upstream 1208589 11213526 ~ 11215087 (+) False G92772
TU138047 other downstream 142507 12571631 ~ 12575212 (+) True G93296
XR_006252318.1 other downstream 157762 12586886 ~ 12588853 (+) False mgme1
XR_006252431.1 other downstream 787534 13216658 ~ 13216757 (+) True LOC122357146
TU138522 other downstream 1310483 13739607 ~ 13909603 (+) True G93613
XR_006252357.1 other downstream 1924992 14354116 ~ 14367135 (+) False frmd6

Expression Profile