RNA id: XM_043254695.1


Basic Information

Item Value
RNA id XM_043254695.1
length 2161
RNA type mRNA
GC content 0.50
exon number 12
gene id micu1
representative False

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 23183915 ~ 23238517 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGACGTTCGCTGTGGGGTGTGTTTGCGCTCGGCCTCCGTAGACGCGGAACTTCAGCGGAGACTGCCGTTAACGGAGAACCGGAGGAGAATCTATAGCCTTTGTTGAAGAAATCTTCCGTGCAGGACTTTAACTGAGATCGCCTGAAGTGTCAGATATGTACCGCTTGCGGGCGCTGACGGCCGCCACCGTCGGGATGGTGCAGTTGTCAAGACGCCATCACACCGGTGCCTTCCGTTCCTATCAGCGGCGCAGACTGATGCTGGCTGCCCTGGTGGGGGTGACGGGCGTCTCAGCCAGCACTGGACTACTGTGGTCAAGAGCACACGCAGAGGCGGGGTCTTCGGTCAAGCATGAGGAGCagatgaaggaggaggagcctcTGAAGGATGTGGATGAGGAGGCGGAGTCGGACGGCGCACTCGAGTCGAGTAGCGGGGGAGAAGATGATGAGGCGGGCTCAgaagggaagaaaaagaaacaacgaGTCGGCTTCCGTGACCGCAAGGTGATGGAGTATGAGAACCGGATTAGAGCTTACTCCACCCCAGACAAGATATTTCGCTACTTCGCCACCCTGAAGATCATCAGCGAGCACGGAGACGCCGAGGTGTACATGACACCGCAGGACTTCGTGCGCTCCATCACTCCCAATGAGAAACAGCCAGAAAaCCTTGGTCTAGATCAGTTTGTGGTGAAACGCTATGATGGAAAGAAGATCTCTCAGGACAGAGAGAAGTTTGCAGACGAGGACAGCATTTTCTACACACTAGGGGAGTGTGGACTCATCTCTTTCTCTGACTACATCTTCCTCACAACCGTCCTTTCCACTCCTCAGAGGAATTTTGAAATCGCCTTCAAGATGTTTGACTTGAACGGAGACGGAGAAGTCGACCTTGAGGAGTTTGAACAAGTTCAGAGTATTATTCGTTCTCAGACCAGTATGGGCATGAGACACAGAGATCGCTCCACCACAGGAAACACGCTGAAAACAGGAGGCTGCAGTTCAGCCCTCACCACCTACTTTTTTGGGGCCGACCTGAAGGGCAAGCTCACCATCGGCAGTTTTTTGGAGTTTCAGAGGAAATTACAGCATGATGTGCTAAAGCTTGAGttTGAGAGGAATGATCCAATGGATGGCAGGATCACAGAGAAGCAGTTTGGGGGAATGCTGCTGGCCTACAGTGGCGTTCAGTCTCGCAAACTCAAACAGATGCAGAAGAACCTCAAAAGGATGTTCAAGGATGCTCAGggcatCACGTTTGAAGAAGTGGAGAACTTCTTTACCTTCCTCAAGAATGTTAATGATGTGGACACCGCGCTGAGTTTCTATCACATGGCAGGCGCCTCGATAGATAAAGCCACCATGAAGCAGGTAGCCCGCACCGTGGCCAAGGTGGAGCTGTCTGACCATGTGTGTGACGTGGTGTTTGCGCTCTTCGACTGTGacgGAAACGGGGAGCTGAGCAATAAGGAGTTTATCGCCATCATGAAACAGCGTCTGATGCGTGGGCTGGAGAAGCCCAAGGATATGGGTTTCACCCGGCTGGTGCGCGCCATGTGGAAGTGTGCTCAGGACACAGCCTGGGACTTTGCTATGCCCAAACAGCAGTAACGCCCGTCCGTTGATGTTTACGCTCCATATGGagtataattaatcattaaaggACGAACTCGTTTGGAAGGCGCATGCCTAGATGACTACAGCTCATCCTCGGGCCTTCTGTGCCCTCTACTCTACTCAACATCCAGAGCTCACTATCTTCTATTTATTTCATGCCGTCGGCCTTTTTCGGAGTTGAATGCACAATTCTACATACACTAGAATGTGACTGTAGCATGTAAAAAACACAAGAGCGAGAGGTCATCATCAAGTGCCATTGGTCTGAAACTAATGTTAGGACTTACTCAgataattcatataatattcAGCTTTAATTTCGAAACGCTCACCATCGCTTGTTCAGCAGAACGATCCTTATTTTGCACTCCTGTTGTCAAATGTATCTCAGTGTCCACTTCAGAATGGAATTATTAGCATCCGGTGACAACAAGCAATCTCCATTTTGTTATAAGCTGCATTAATGTTTTGGAAATCTCATTGTTGAATGGCTTTATAAGAGTGATGCTGAAAGAATGatactattaaaacattttacatta

Function

GO:

id name namespace
GO:0070509 calcium ion import biological_process
GO:0051560 mitochondrial calcium ion homeostasis biological_process
GO:0006851 mitochondrial calcium ion transmembrane transport biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0032592 integral component of mitochondrial membrane cellular_component
GO:0005509 calcium ion binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU142128 lncRNA downstream 5819 23176802 ~ 23178096 (-) True G96117
TU142099 lncRNA downstream 29420 23152205 ~ 23154495 (-) True G96108
TU142100 lncRNA downstream 29420 23152205 ~ 23154495 (-) False G96108
TU142019 lncRNA downstream 154015 23017198 ~ 23029900 (-) True G96061
TU142018 lncRNA downstream 176452 23006279 ~ 23007463 (-) True G96060
TU142211 lncRNA upstream 200760 23439277 ~ 23443783 (-) False si:ch211-130h14.4
TU142295 lncRNA upstream 300261 23538778 ~ 23542300 (-) True G96254
TU142315 lncRNA upstream 688814 23927331 ~ 23928060 (-) True G96265
TU142336 lncRNA upstream 804011 24042528 ~ 24067735 (-) True G96279
TU142347 lncRNA upstream 831643 24070160 ~ 24070488 (-) True G96286
XM_043254878.1 mRNA downstream 15012 23167873 ~ 23168903 (-) False mrps6
XM_043254877.1 mRNA downstream 15013 23167873 ~ 23168902 (-) True mrps6
XM_043254869.1 mRNA downstream 16824 23157102 ~ 23167091 (-) False LOC122356317
XM_043254868.1 mRNA downstream 16824 23157102 ~ 23167091 (-) True LOC122356317
XM_043254876.1 mRNA downstream 47273 23134818 ~ 23136642 (-) True c1d
XM_043256000.1 mRNA upstream 86265 23324782 ~ 23329933 (-) True pla2g12b
XM_043256001.1 mRNA upstream 86265 23324782 ~ 23329932 (-) False pla2g12b
XM_043255473.1 mRNA upstream 94303 23332820 ~ 23416851 (-) False pde10a
XM_043255478.1 mRNA upstream 94303 23332820 ~ 23416844 (-) False pde10a
XM_043255472.1 mRNA upstream 94303 23332820 ~ 23416244 (-) False pde10a
TU142010 other downstream 188316 22994663 ~ 22995599 (-) True G96053
TU141976 other downstream 360656 22821981 ~ 22823259 (-) True G96036
TU141977 other downstream 361401 22821981 ~ 22822514 (-) False G96036
TU141882 other downstream 740629 22379092 ~ 22443286 (-) False LOC122356262
XR_006252429.1 other upstream 1031797 24270314 ~ 24270449 (-) True LOC122357144
TU142459 other upstream 1104344 24342861 ~ 24344630 (-) False borcs7
TU142467 other upstream 1160606 24399123 ~ 24403644 (-) False fgf8a

Expression Profile