RNA id: XM_043254769.1


Basic Information

Item Value
RNA id XM_043254769.1
length 1343
RNA type mRNA
GC content 0.55
exon number 4
gene id LOC122356237
representative False

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 2891387 ~ 2913516 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GAGAAAGCGAGTGCATTGTAGTGCTCGGACATCAACAGTCTCGACGCGTCTTTTCGCTTTATAACAAGTCTTACCGCAGTCGTATCGAAACGGCTGGCAAAATGCAGTATAATCGACATCGTGTCCGCATGAAAGGGTTTTGCTGGTGATCCCCCCCCCTCGCTCTTGATAGATGACTTCTCGAAACGGGGGCAAAAACCGGACACttgcactttttattcatcactCTGCTCCAGAAATCAAATAGTAACCGGATGCAGCCCGTGACTCGCCGCTGAGATCAGTCGCGGTTCGGATGAACGTTTACTGAGCGCTGTACCGGCTCACCTCGGAAGGAAAGAGGGGAAGTGACACTTGAACCTCATGCCTCCACAAAGCCATTCATGAGGCACGGCTTCCTCCGCACCAACAGACCAGCATGGAGAAAGGAGTCCGGACACGACTAGAAACAGGAGCGGCAGACGAGAAAGACGCTCTCGCTCAAGGGATGACCCCATCGGCGGGGACTGCCGACTTGGGACATGAATGTTGCAAACGCAACGGTCTGATCAATACCCACAACCTGATGGTGGAGACTAAGGAAGGACTGGTGTCTGTCTATTCTGCTCCACAGTACCAGGGCCATGTGGTGTCCAAGGACATAAATGGGACACCGGATGGTCGAGGACCCCCACAGTTGCTCAACCCCAGCGCCCTGCCCCAGGCTATAGACCCTTACTACAGACCCAACCTGCTTCTGTACCCCGAGAGCGTGCTGAGAGCTTGGGGAGAGGGGGGGGACTGCTGCGAGACCACCTTCATTGAGGAGATGACCCCCGGCCCGTCCGGCTCAGCTGTCGCTAAAGACGGGATTCTGTTCACCGACGGCAAGCTGCTGGATCTCTCCATGGAAGACGCCAAGATCCAGACGCTCTCCTACGATGTGGATGACGATGACGATGAGTTTCAAGAACTCGAGaGCGAGTACTCCAGTGACTCAGAGAGTGAAGACAATTTCCTTCTGATGCCTCCGAGGGACCACCTGGGCCTCAGTGTTTTCTCCATGCTCTGCTGTTTCTGGCCCCTGGGCATCGCAGCTTTCTACCTGTCTCACGAGCTCTCGTACGCGATCATAGCTCGTTCACAATCCAGACCTTCTCGAAACATGTCAACGTGCGCTATTTGTGTCTTTGTTCTCCCTCTCTCACGCAGACCAACAAAGCGGTGACTAAAGGAGACTTTCACCACGCCAGCTCCAGCTCCAGACGGGCGCTGTTCCTCGCCGTGCTGTCCATCACCATCGGGACGGGCATCTATGTGGGTGTTGCTGTGGCACTTATCGCATACCTCTCCAAAAACAATCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU133705 lncRNA downstream 268434 2624904 ~ 2625273 (-) True G90312
TU133683 lncRNA downstream 269798 2621236 ~ 2623909 (-) True G90300
XR_006252293.1 lncRNA downstream 391249 2500535 ~ 2502458 (-) True LOC122356206
TU133632 lncRNA downstream 412065 2481370 ~ 2481642 (-) True G90271
XR_006252342.1 lncRNA downstream 450223 2442247 ~ 2443484 (-) True LOC122356497
TU133906 lncRNA upstream 30194 2943710 ~ 3194742 (-) False G90431
TU133908 lncRNA upstream 30194 2943710 ~ 3194742 (-) True G90431
TU133910 lncRNA upstream 36782 2950298 ~ 3201099 (-) True G90432
TU133916 lncRNA upstream 61480 2974996 ~ 2977696 (-) True G90437
TU133922 lncRNA upstream 72420 2985936 ~ 3013736 (-) True G90441
XM_043254772.1 mRNA downstream 27882 2862008 ~ 2865825 (-) True LOC122356239
XM_043254771.1 mRNA downstream 40323 2848173 ~ 2853384 (-) False si:zfos-1056e6.1
XM_043254770.1 mRNA downstream 41386 2848173 ~ 2852321 (-) True si:zfos-1056e6.1
XM_043254726.1 mRNA downstream 284839 2607080 ~ 2608868 (-) True LOC122356217
XM_043255829.1 mRNA downstream 396286 2488427 ~ 2497421 (-) True LOC122356775
XM_043256387.1 mRNA upstream 39723 2953239 ~ 2955452 (-) True tuba4l
XM_043254523.1 mRNA upstream 137032 3050548 ~ 3052828 (-) True LOC122356071
XM_043254524.1 mRNA upstream 137032 3050548 ~ 3052788 (-) False LOC122356071
XM_043254520.1 mRNA upstream 143232 3056748 ~ 3072394 (-) True LOC122356068
XM_043255950.1 mRNA upstream 362652 3276168 ~ 3278381 (-) True mea1
TU133704 other downstream 266550 2626328 ~ 2627157 (-) True G90311
TU133689 other downstream 308376 2584196 ~ 2585331 (-) True G90304
TU133469 other downstream 648629 2151837 ~ 2245078 (-) True G90161
TU133318 other downstream 1201772 1684449 ~ 1691935 (-) True LOC122356758
TU133116 other downstream 1336704 1556169 ~ 1557003 (-) False LOC122356439
TU133931 other upstream 76902 2990418 ~ 3021862 (-) True G90445
XR_006252267.1 other upstream 1759450 4672966 ~ 4689168 (-) False LOC122356061
XR_006252269.1 other upstream 1759450 4672966 ~ 4689168 (-) False LOC122356061
XR_006252268.1 other upstream 1759450 4672966 ~ 4689168 (-) False LOC122356061
XR_006252266.1 other upstream 1759450 4672966 ~ 4689168 (-) False LOC122356061

Expression Profile