RNA id: XM_043254770.1



Basic Information


Item Value
RNA id XM_043254770.1
length 852
RNA type mRNA
GC content 0.42
exon number 9
gene id si:zfos-1056e6.1
representative True

Chromosome Information


Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 2848173 ~ 2853384 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TTTATACTCCTTATCTGTGctttaatttagaaatgtagTCTATTGTAGTTGTTCTACATTCATCAatgttttaatagtaaaaaaaataacattttattaaaatgttggctttagttatgaaaaatatactttttatatggTTTTATGGTTTCTGTCTTCACACCGCTGGTTAAAGCACAACCAGCCCTCGCCTGATTCTGGACGGAGAGGTGCGTGCGGATCCTCCGATGGCTTTTTTTAATACGGAAAACATTCGTCCTGTTTGGATCGCCCTCAAGAGGCTCGATCTCAACGATAACAGGATCATAGCTCTCCGGGAGGTTCACATTCCGAGTGGAGCCCAAGCGACCAGCATAAAACAAATACTAGCTCATTCTTTCAGGCTTGACACTTCTCAGACGATACTCAAGATACGAAATAATCGAGGATGTCTAATTCCATTAAATTCCTGCATGCCACCAAACAGCAAGCAAATGCCGTACGTCCTCGAAGTGGCCAAAAACCACCAGCATGtcaacCCGAGACCCAGAAGAATTCCCATGATCGTCATCAATAAAACCCTGAAGTCGAGACTGCAGAGCGTCGGGAAAAGGATCGAAAGGTTAGAAGAACTGCTGCCTCAGATCAAGCTCAAACAGCATGAAAGGTTGACAAAGGACATTGAGTTACTGAATCAAAAGCTTGTATTTCTTCACAAACGAATGCAGATGGCCGAGTCATATCGCTGGGAGGGGATGTTGAGAAGAGCTCCGCTGTGGTGAATGCTGCCGGTTTCACACGACCATACACATCTTAGAGACTagttcagtttttgttttgtatctgTAGAGAATCAATAAACCATGTATTTTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU133705 lncRNA downstream 222900 2624904 ~ 2625273 (-) True G90312
TU133683 lncRNA downstream 224264 2621236 ~ 2623909 (-) True G90300
XR_006252293.1 lncRNA downstream 345715 2500535 ~ 2502458 (-) True LOC122356206
TU133632 lncRNA downstream 366531 2481370 ~ 2481642 (-) True G90271
XR_006252342.1 lncRNA downstream 404689 2442247 ~ 2443484 (-) True LOC122356497
TU133877 lncRNA upstream 44717 2897038 ~ 2897468 (-) True G90408
TU133906 lncRNA upstream 91389 2943710 ~ 3194742 (-) False G90431
TU133908 lncRNA upstream 91389 2943710 ~ 3194742 (-) True G90431
TU133910 lncRNA upstream 97977 2950298 ~ 3201099 (-) True G90432
TU133916 lncRNA upstream 122675 2974996 ~ 2977696 (-) True G90437
XM_043254726.1 mRNA downstream 239305 2607080 ~ 2608868 (-) True LOC122356217
XM_043255829.1 mRNA downstream 350752 2488427 ~ 2497421 (-) True LOC122356775
XM_043256325.1 mRNA downstream 367844 2478583 ~ 2480329 (-) True gsta.1
XM_043255138.1 mRNA downstream 381907 2458880 ~ 2466266 (-) False LOC122356433
XM_043254772.1 mRNA upstream 9687 2862008 ~ 2865825 (-) True LOC122356239
XM_043254768.1 mRNA upstream 39066 2891387 ~ 2913514 (-) True LOC122356237
XM_043254769.1 mRNA upstream 41386 2893707 ~ 2913516 (-) False LOC122356237
XM_043256387.1 mRNA upstream 100918 2953239 ~ 2955452 (-) True tuba4l
XM_043254523.1 mRNA upstream 198227 3050548 ~ 3052828 (-) True LOC122356071
TU133704 other downstream 221016 2626328 ~ 2627157 (-) True G90311
TU133689 other downstream 262842 2584196 ~ 2585331 (-) True G90304
TU133469 other downstream 603095 2151837 ~ 2245078 (-) True G90161
TU133318 other downstream 1156238 1684449 ~ 1691935 (-) True LOC122356758
TU133116 other downstream 1291170 1556169 ~ 1557003 (-) False LOC122356439
TU133931 other upstream 138097 2990418 ~ 3021862 (-) True G90445
XR_006252267.1 other upstream 1820645 4672966 ~ 4689168 (-) False LOC122356061
XR_006252269.1 other upstream 1820645 4672966 ~ 4689168 (-) False LOC122356061
XR_006252268.1 other upstream 1820645 4672966 ~ 4689168 (-) False LOC122356061
XR_006252266.1 other upstream 1820645 4672966 ~ 4689168 (-) False LOC122356061

Expression Profile