RNA id: XM_043255005.1


Basic Information

Item Value
RNA id XM_043255005.1
length 5673
RNA type mRNA
GC content 0.44
exon number 24
gene id tmem63ba
representative False

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 18744006 ~ 18771823 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AAACAGTTCGTGGGTTGCCTATCAACCGCTCATACACCGGCCCGACGCATCACAACCATGCTAGGGCTTGTTGAGTGTCAGTGTCATACACGAGACACTAACTGAACGATGGACTGATCCTCGGCGTTTTGTTTTTCCGAACGCTATCAAATCGTTTCGATTAAGCGCCGAACTGGAATTTTGAGATCATTCCGGTTATTTTGGGATATTACCGAAGTAGCTAGCCGAGAGCTACTTTGGCTTTGACCACTGCGTCCAGGTGGAGTTTCAGTATGCAGCTGTACTGAGGATGCTGGCTGTCTTAGCTTTGCTCATGATGGCTACGACCAGTCAAGCGGAGTCCTGCCAAGGCCCTGGGAACTGCTCCACCGGCTCTAAGGACTTTTGCTATTCGGCCCGGATCCGCAGCACCGTGCTCCAGGGCCTGCCCTTCGGAGGAGTGCCCACCGTACTCGCCCTTGACTTCATGTGCTTTTTGGTGCTGCTATGTGTGTTCTCTTTCTTGAGGAAGGTGGCGTGGGATTATGGGCGCCTCGCATTGGTCTCTGATGCCGACAGccGTAGGCGGAATCAGCACTATCAGCGTCTGGACGAGCAGGAATATGTGGCCTCCGCCATGCAGACGCCTGCTGACTCCCGATACGAGCGCCTCACCTCTGTGTCCAGCTCGGTCGACTTTGACCAAAGGGACAACGGCTTCTGTGCCTGGCTAACCGCCATCTTCAGGATAAAAGATGATGAGATCAGGGAGAAGTGTGGGGAGGATTCAGTGCACTACCTCTCATTCCAGCGGCATATCATTGGTCTGTTGGTAGTGGTGGGCGTGCTCTCCGTGGGCATCGTCCTGCCCGTCAACTTCTCAGGAGACCTATTAGAAGATAATGCCTACAGTTTTGGGCGAACTACAATAGCCAACATAAAATCTGGtAATGACCTGCTGTGGCTGCACACTACATTTGCCTTCTTTTATCTGTTACTGACTGTGTACAGCATGAGAAGACACACATCAAAGATGCACTACAAAGAGGACGACTTGGTGAAACGCACTTTATTCATTAATGGGATCGCAAAATATGCTGAAGAGAGTcaaataaagcagcattttgAGAAAGCATATGAAAACTGCATGGTTTTGGATGCTCGCATTTGTTACGACGTTGCCAAGCTTATGTCTCTGGAGTCTGAAAGAAAAAAGGCAGAGCGCAGCAAAAAGTTCTACACCGACCTGATGGCCAAGGAGCACATGTCCACTATGATTAACCCCAAACCCTGCGGTCATCTCTGCTGCTGTATCATCGCGGGCTGCGAGCAGGAAGAGGCTGTGAACTATTACACTAAGCTCGAGGCCAAACTAAAGGAAGAATACAGGAAAGAACGAGAAAAAGTCAACACTAAACCTCTGGGAATGGCTTTTGTTACCTTCCAGAATGAAGCAATGACAGCCCTCATCTTGAAAGATTTTAATGCATGTCAGTGTCACGGCTGTCACTGTCGACGAGAGCCGAAAAGCTCCCCCTTCAGCACCCTCCTCAACACAAACAACTGGACAGTCACGTATGCTCCAGATCCACAAAACGTTTACTGGGAGCATTTGTCTGTTGGTGGCCTCAACTGGTGGTTACGCTGCTTTGTCATCAACTGTTTTCTGTTCCTCTTGCTCTTCTTCCTCACCACCCCTGCCATCATCATCTCCACCATGGACAAGTTCAATGTCACCAAACCCGTGGAGTACCTGAACAACCCCATCATCACTCAGTTCTTCCCTACTTTGCTGTTGTGGTGCTTCTCGGCCCTTCTCCCCACCATCGTCTACTACTCTGCCTTCTTTGAGGCCCACTGGACACGATCTGGAGAGAACAGAACCACCATGCACAAATGCTACACCTTCCTCATCTTTATGGTTCTGCTGCTGCCATCTCTGGGACTGAGCAGtTTGGATGTTTTCTTCCGCTGGCTCTTTGACAAGAAATTCCTCGACGAGGCAACGGTCCGATTCGAGTGTGTCTTCCTTCCAGATAATGGAGCTTTCTTTGTGAACTACGTCATAGCGTCTGCCTTCATTGGTAACGCCATGGACCTGTTACGCATTCCTTATTTTCTTATGTACATGATCCGGCTGTGTCTGGCACGTTCGGCTGCCGAGAGGCGCAACGTGAAGAAGCATCAAGCTTATGAGTTCCAGTTTGGAGCTGCTTACGCCTGGATgatgaatgtctttactgtggtCATGACCTACAGCATCACCTGTCCAATTATTGTACCTTTTGGACTGATGTACATGCTACTGAAGCACCTGGTGGACAGGTATAACATGTATTATGCCTACCTGCCTTCCAAACTGGACAAGAAAATCCATTCTGGAGCGGTCAACCAGGTGGTGGCCGCACCAATCCTTTGCCTTTTCTGGCTGCTCTTCTTCTCTACTGTCCGTACAGcatttgttgCTCCAACATCAATGTTTACCTTTGTGGTTCtgatcatcaccatcatcatttGCCTCTCCCACGTCGTCTTCGGTCATTTCAAATACCTCAGTGCACACAATTACAAGATCGACATGGACGGTGTGGACAATGGACGACCACTGGGTTCATCTCCACCTGTCAAGTCTGTGCAGACATACGTCGCCCAAGTGCTACAGGACCCAAACACAGATGAGACGGGAAGTGAGGAGGGCCAGGGGTCATcgcaggaggaggaggtggtgacCGAAGGTGATTTCCAATCAGGAGAGGACAGTCTTATTGAGAACGAGGTGCATCAGTGACCCAGGCAGGGCCACGCCGTGTGCTGAACTTAGAGAAACTAGCAAGACTTCAACTTGACCAAACGGAGATCCACTGCACCTCGCTACACCTTCTGAGCGTGTGAATCCACCACGGCTCACAGCTAAAACACTCATTTATCATTGAGGCTTGGAGACAGGATGGCCAATTGTCAAGAATATGGAGTGGCTTGTGATTGTTCTCCAACGATTAGAAACTTGAGTTTCATCATTCTTCTTTACATTGGTTACCCTGTTCGTACGGAGCTTCTTGCCGTTGCAAGCGCATGTCTAGTAAATAAGACCAAGATCAGTAATGATTGCTCataatttgcaattaaaattagaatttacCTATGTTATGATGAAGTGACTCAGCTATAGTGCTATCTCAGTTGGGGAGGAAAATTGTATATTAGGGTATATCACAAAGAGAGGGCAGATTTCACCTACAAAACCTGTACATGACGAAAATCTAAAAGGATTTCTTAGGAAATGAGATACATAGGATAATGGTCCACTAAACAGTTTGTTGAgagttaaaacaaaaatggataCATGGTAATGGAAAGGTATGATTAAACCAGTCAGAATTATGTATTCAGACAGCCATGTAATCATTTACAATAACTCATTTTTAGCAACACCATATCTCCATCTTAACCATCTGTAGCACACAGAAAGCTTTTGGAATAAACACCAGTAATCTGAATGTTCCTGAAAGTTTTGAGTTTTGGTTCAGAAGTGAGACGTTATTTTCTTCGTCTCAGCTGAAATGGCACTATAGCACAATATTTTCGGAGATGAGCAAATTAATTTACTCAACTTTTATTCTTCTCTACCAAAGTGAATGTACTGTATCTAACAAAGACTATTACTAGTCCCTCTCGTATAAGGAATTGTTGGAAAACACGGGATCGAAAAACTCACTCCAGCCTGCTGAATTAACCGATTGTGAGGGAAAACAGCCGCCGAACACTAATCGTCTCACTCTTTACTTGAACTGGAAAAGCCACTTTTAGACTGTCTGACAGACTCGAGGCAAATCACCATCCCTGGATCTGTTCCCCTGTCCACCCGTACGTCTTCTGCGCATCCAGTGTTTAAATGTAAGCCTACACATCGCTCAAGCATACCTGCGATATGCTCGGTATGACGCTTCTTTCGAAATCGAGGCATCGAATGGACCAATTTTAAATGGTGTTGCTCTACTGTGGAATGTCCTGTCGATAACTGATACTGTAGCAAAAAGAATTTAAACGCACAGCAGATTCCAGTTGTGGACTAAAGGTGGAATTTGtgaatgtgaatatatttttttccttttttgttatGCATGGGTATGGAATAACGGTTTCATCAGGTTTTGTtgacttaaattttttttcattttgttgccACTAAGAAGTGATGTACACAATACCATTTGTGATCACTTACTCgtaaacactgtaaaaacaaaaaaaagtgcatgggAAACGTAATCAGAAATCCCCGAACATCCTCAACTTTTGGTTTATGATGACAGCAAGATTTTGGGTCTCTAGGTCATTCGGGGTCACATTTCCTAAATGAGACCTTATTTATTGCAATAGCGGTGTGTTCCTTTACAATTTTACAAGCGAACTGGAATAACAGACACTGTTCCGTGGTTCTTACCTGTGTGCATTTACAAGCTTTTTGCCGACACCCTTGCAGTTGTGAGCTTATTTGACTGGGGTTTATGCTTCATTTATTGGTTGAAGTctggaaaaaaagaacacaaaaaacgAGTTCATTGACTACTATTTATtagccactttttttttaaacaaccaCACTCTTTATATCCGTTTTGTCCTCGCGTTCAGACATTTTTGCTACTGCGTCcattatatacatattgcaTATATGCTCTCCGTGCATTGTCGAAATGCGAGTCAGAACCCGAAAcgaaatattttttagtttagttccTCTCAAAATAAGCAGACAAAGGCTGTGCCTGAGTacttgctttaaaatgtaactacttaatttttttttttcgtccaGCCTTTAATTGGTTGACCTTTCCCAGCTAGTGGACCTAAATAGTTCTCATTGTCATTTATTGTTTACAGAAATAGCGGTGCAGTGTTTAAACTGTCATTTTCTGCAACAAATGTTAACTTGAAACAGTTGTCGGTGTGTGTAAACTTGTGAATTAGAACATATTAGtgatatttttagttaatttatgtAAATCACACTAATCTACCAATCGATCACTGAGGAGCTTTGTAACtgttaaatgcaaataacaCTGTAGGCTATGCACTTCATGTGGAATATGTAACATTATCATGGTGTATGTAACGATATCAAGCCATTTTTGTCAGTGATCTCATTTGGATAACATTGAGTAACTGCAGTGCTTTGTCGGTCTGACGCTCTTGCTGCTTAGATACTGTAGATGATGACCATATGACTGCATCCTGGATCTATTTAAGGAAAAACACTGTCTTCAAGCATGATGCggcaataatttatttatgcatctttATAGGCTTTTCCCATTTGTTACAGATGTTGTccacaatatttatttcttttgtctaTTACTTTTCCTAATTTTGAATTAACCGGCCCACTGGCCTGGATTGAAGTGGTTAAATcagtgtaatatttttgtaaatagaaGCATTGCACTGCTCTCGGAACACtaaactatatttacatttgtacagCTTAGCCAGCAAAACCATGTACAGTCAACCATGAATTGTTTGCTTTTGTCCATTCGGAGTTCCCCTTAAGATCGTACTTTGCTTGCAGttgctgtttttaatagttttgtatCTCAACCTTCCCTCAAATGATCTTTTGTACAGTGTCATCCTCAAACTCTTCCATGTCTTTGAACAATAAAATAGACTGACAAAACCATA

Function

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0000166 nucleotide binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU140197 lncRNA upstream 112289 18545352 ~ 18631718 (+) True G94776
TU140199 lncRNA upstream 112289 18545352 ~ 18631718 (+) False G94776
TU140198 lncRNA upstream 112289 18575490 ~ 18631718 (+) False G94776
TU140210 lncRNA upstream 217376 18526402 ~ 18526631 (+) True G94787
TU140208 lncRNA upstream 224096 18519640 ~ 18519911 (+) True G94785
TU140243 lncRNA downstream 8578 18780401 ~ 18785449 (+) True G94816
TU140367 lncRNA downstream 57493 18829316 ~ 18829539 (+) True G94883
TU140407 lncRNA downstream 128795 18900618 ~ 18933128 (+) False G94913
TU140404 lncRNA downstream 128845 18900668 ~ 18956194 (+) False G94913
TU140405 lncRNA downstream 128845 18900668 ~ 18955920 (+) False G94913
XM_043256068.1 mRNA upstream 372654 18368314 ~ 18371353 (+) True LOC122356945
XM_043255909.1 mRNA upstream 476173 18264627 ~ 18267834 (+) True LOC122356838
XM_043255908.1 mRNA upstream 482727 18260197 ~ 18261280 (+) True LOC122356837
XM_043255690.1 mRNA upstream 617531 18119711 ~ 18126476 (+) False bsdc1
XM_043254553.1 mRNA downstream 1364 18773187 ~ 18776934 (+) False LOC122356089
XM_043254552.1 mRNA downstream 1365 18773188 ~ 18776934 (+) True LOC122356089
XM_043256120.1 mRNA downstream 40448 18812271 ~ 18816117 (+) True mtrf1l
XM_043256121.1 mRNA downstream 40448 18812271 ~ 18816117 (+) False mtrf1l
XM_043256119.1 mRNA downstream 44340 18816163 ~ 18819554 (+) True fbxo5
TU140195 other upstream 112289 18545352 ~ 18631718 (+) False G94776
TU140212 other upstream 206564 18536892 ~ 18537443 (+) True G94789
TU140175 other upstream 304424 18439173 ~ 18439583 (+) True G94760
TU139910 other upstream 1168069 17560296 ~ 17575938 (+) False G94564
TU140499 other downstream 384473 19156296 ~ 19162325 (+) False lhcgr
XR_006252404.1 other downstream 785326 19557149 ~ 19589504 (+) False foxn2a
XR_006252347.1 other downstream 846189 19618012 ~ 19665614 (+) False LOC122356529
TU140828 other downstream 1175707 19947530 ~ 20004002 (+) True G95223
TU140845 other downstream 1305462 20077285 ~ 20102120 (+) True G95239

Expression Profile