RNA id: XM_043255027.1


Basic Information

Item Value
RNA id XM_043255027.1
length 926
RNA type mRNA
GC content 0.36
exon number 6
gene id zbtb8os
representative False

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 17742959 ~ 17752932 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

attatgaaaatgaatgcagGAGCCAAAGTTCAAAGTTTCTGCCTTCACGCTATATGTCTAGCACAGTTTCGCGGAAATAACAAGTACAGGGCATTACAAATAGATCAGAACAAAACAATGGACGACCGCGAGCTTGATCTCACAGAAGCGCAAAAAGCCATCAAATCAAAGTATCCTCCCATCACCAAGAAATACGAGTgATTCATTCATGGGGTGATTCTTTGGAAGAAGCTTTTGAACAGTGTGCAATGGGGATGTTTGGTTACATGACGGACACGGAAACTGTTGAACCCATTGACACTATGGAAGTAGAATCAGAAGGGGATGATATGGAGTCGCTCCTTTTTCACTTCTTGGATGACTGGCTCTTTAAATTCAGCGCTGACGTCTTCTTCATTCCCAGGGAAGTGAAGGTCTTGAGCATAGACCGAATGCGCTACAGAATCCGCTCCATAGGgtgGGGTGAAGAGTTCAGCGTAAATAAACATCCGCAGGGAACAGAAGTGAAAGCAATCACTTACTCTGCTATGCAAGTACATGAAACGGAAAAACCAGAGATCTTTGTCAtcattgatatttaaaaaaaaaaatgaataaattttatAAGTTAATTTAACACCCCGTGTTTATTTTCAAGATTTTAAAAGGTGTTGAAATAGAAGTGAGAGGTGTCTTTTCTGTAAAGAATTTTGTGGATTGCCCGGCTGAAATGCTTTATTTCGTATCAttgtcattattaataattatattatttcaatattttcattaaataacatCATGAAGAAACACTCCTGTGAAAGAAAAccctgattttatttcatttggttTTTGTCTTAAGTTTATTACTGTTAGacaattgaaaatgttttaataaaaaaaatacatataaagctttgtataataaaaacctttaaattcaGCAGCCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU139885 lncRNA upstream 497990 17212947 ~ 17244969 (+) True G94543
TU139822 lncRNA upstream 712884 17021864 ~ 17030075 (+) True G94501
TU139823 lncRNA upstream 713359 17021864 ~ 17029600 (+) False G94501
TU139800 lncRNA upstream 804305 16926914 ~ 16938654 (+) True G94484
TU139793 lncRNA upstream 817822 16886084 ~ 16925137 (+) True G94481
TU140025 lncRNA downstream 136722 17889654 ~ 17889901 (+) True G94637
TU140151 lncRNA downstream 409045 18161977 ~ 18162280 (+) True G94741
XR_006252355.1 lncRNA downstream 510376 18263308 ~ 18264596 (+) True LOC122356621
TU140164 lncRNA downstream 510592 18263524 ~ 18270603 (+) True G94750
TU140167 lncRNA downstream 620631 18373563 ~ 18375173 (+) True G94753
XM_043254671.1 mRNA upstream 320137 17421621 ~ 17422822 (+) True LOC122356173
XM_043255894.1 mRNA upstream 757757 16976130 ~ 16985202 (+) True zfyve21
XM_043256248.1 mRNA upstream 842596 16894884 ~ 16900363 (+) True dact2
XM_043254574.1 mRNA upstream 875428 16834290 ~ 16867531 (+) True smoc2
XM_043254575.1 mRNA upstream 875428 16834292 ~ 16867531 (+) False smoc2
XM_043254561.1 mRNA downstream 193327 17946259 ~ 17952030 (+) True syf2
XM_043255018.1 mRNA downstream 212058 17964990 ~ 17966886 (+) True mgst3b
XM_043255016.1 mRNA downstream 215131 17968063 ~ 17973664 (+) True tmem50a
XM_043255012.1 mRNA downstream 227447 17980379 ~ 17994138 (+) True maco1b
XM_043255011.1 mRNA downstream 227461 17980393 ~ 17994138 (+) False maco1b
TU139910 other upstream 167021 17560296 ~ 17575938 (+) False G94564
TU139911 other upstream 180711 17560296 ~ 17562248 (+) True G94564
TU139637 other upstream 1137576 16597781 ~ 16605383 (+) True G94378
TU139570 other upstream 1224133 16515827 ~ 16518826 (+) True G94324
TU139572 other upstream 1226200 16515827 ~ 16516759 (+) False G94324
TU140175 other downstream 686241 18439173 ~ 18439583 (+) True G94760
TU140212 other downstream 783960 18536892 ~ 18537443 (+) True G94789
TU140195 other downstream 792420 18545352 ~ 18631718 (+) False G94776
TU140499 other downstream 1403364 19156296 ~ 19162325 (+) False lhcgr
XR_006252404.1 other downstream 1804217 19557149 ~ 19589504 (+) False foxn2a

Expression Profile