RNA id: XM_043255067.1


Basic Information

Item Value
RNA id XM_043255067.1
length 1907
RNA type mRNA
GC content 0.43
exon number 9
gene id ephx5
representative True

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 12605843 ~ 12610037 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ttggctAGTAAGTTTGTTGGGGAACAGAACCGTTGTACTCTGTACTCTGACCATGATTTGCATTTTGAATGTTACGTTATCATAGTTGATTGTAAACTTTTCAGTGCAGCTTTGTCTGAAAAAAGACGAAGATGGGTTTTGAAGACTCTGTTATGCAGACAATTCAATACGTCAAAGAGACCGTTGGTAACCTTGACCGGTCTAAACTACAGCTCCTAGCACTCTCCTCTGCTGGGGTTGGAGCTGTTTTGTGCTACTTGGCATGGAAGCAAAGCCCCAAAACTATACCAGTGGGGGACGGCTGGTGGGGAGCTGGAGAGAAGCCTTTGACTGAGGACGAAACTATTCGCAGATTTGTAGTGAAGACCTCGGTGGAAGAGATAGAGGATCTACACAGACGCATTGATCTAACACGCTTCACGGATCCACTGGAGGAAAGCTGCTTTAATTATGGATTCAACTCTAACTATCTTAAACGGGTGGTCTCTTATTGGAGGCACCAATTTGACTGGGAAAAGCAGGTGAAGGTGATAAACCAGTATCCTCACTTCAAAACCAAAATTGAGGGAATAGATGTGCATTTCATCCACGTGAGGCCAGTCCAAAAGGCTGGACAGACAGTTCTTCCTCTCATGATGGTTCATGGCTGGCCTGGTTCCTTCTATGAGTTTTACAGGATCATTCCCTTGCTCACTAAAACGGATTCAGATGTGGTCTTTGAGGTCATCTGCCCCTCCATTCCAGGCTACGGCTACTCAGAAGCACCACATAAAAAAGgaTTTAACACTATGGAGGCTGCTCGCATCTTCCATAAGCTGATGGAAAGACTGGGATTCACCGGGTTTTACGTGCAAGGAGGAGACTGGGGAGCCTTTATTACAAACAGCATGGCCCAGATGAAGCCAGAGTGCATTCGTGGTCTGCACTTGAACATGGTCATCGCCAGAACAGACAGCCTTGGACAGCTCCTCTCCTTAGTCATTGGTCGCTATCTGCCATTCCTGGTGGGCTTCACAAAGGAAGATGTCAGACGACTGTATCCTTACATGGAGAAGAATATATATGACATACTGAGAGAAACTGGCTATTTACACATCCAAGCCACTAAACCAGACACAGCAGGTTGTGGACTGAATGACTCACCGGTTGGATTGGCCGCATATATCTTGGAGAAATTCTCCTCCTGGACAGATTTAAGAAACCGAGACTTGGAGGATGGAGGTTTAGAGAGAAAGTTTAGTCTAGACGACCTCCTTACAAACGTCATGATCTACTGGACCACATGTTCCATCATTCCCTCAATGCGCTTCTACAAAGAGAACCTGAAGAAAGATTTCAAAACAAGGGTGGACAGAGTGACAAGTGTTTATGTGCCCACTGGCCTGGCTGCCTTTCCTGATGAGCTGCTCCACTGTCCTAGAGCTTGGGCTGGATCACGGTTTTCAGATGTGCGTTCTTTCACCTACATGCCCAGAGGGGGACACTTCGCTGCCTTCGAAGAACCTCAACTGATGGCTCAAGACATCATTCAGTTTGTGGAGAAAGTGGAGAGCAAAGGCCGCAAGTAACAGCAgtatattaagaaaataatgcCATTTAGTGTCATTGGTGCATTTAACAATCTAAAGTTAATTGTCAGTTGTTAATGCAACATTCAACATTAAGGAATGTTGTGGTTTTCCAATGAACCAAGGTTATATGAAGAAGTTCTGCACaatataattttgtcatttgttttgcatGATTTCAGCACTTTACTTACTGTgtactgttaaaaatgaaacactaacTTCtgcttactaaaaaaaaaaaaaaaaagtactttcatcaaattacaatatacattttacaattgcCTGTATGCATAATATCAAccagatttaataaaataagaccCCAAGATTGAA

Function

GO:

id name namespace
GO:0033961 cis-stilbene-oxide hydrolase activity molecular_function

KEGG:

id description
K01253 EPHX1; microsomal epoxide hydrolase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU138058 lncRNA upstream 3302 12602191 ~ 12602541 (+) True G93306
TU138033 lncRNA upstream 8542 12595922 ~ 12597301 (+) True G93285
TU138044 lncRNA upstream 36743 12568484 ~ 12569100 (+) True G93295
TU138036 lncRNA upstream 70779 12533985 ~ 12535064 (+) False jag2a
TU138024 lncRNA upstream 155397 12448374 ~ 12450446 (+) True G93280
TU138293 lncRNA downstream 546893 13156930 ~ 13158438 (+) False tasp1
TU138317 lncRNA downstream 554000 13164037 ~ 13164313 (+) True G93474
TU138346 lncRNA downstream 577548 13187585 ~ 13191795 (+) True G93485
TU138376 lncRNA downstream 736824 13346861 ~ 13348038 (+) True G93512
TU138576 lncRNA downstream 1149519 13759556 ~ 13760734 (+) False LOC122356417
XM_043255083.1 mRNA upstream 16845 12586887 ~ 12588998 (+) True mgme1
XM_043255084.1 mRNA upstream 17512 12586886 ~ 12588331 (+) False mgme1
XM_043255091.1 mRNA upstream 46325 12557143 ~ 12559518 (+) False cfl1l
XM_043255090.1 mRNA upstream 46325 12557148 ~ 12559518 (+) True cfl1l
XM_043255045.1 mRNA upstream 70772 12502385 ~ 12535071 (+) True jag2a
XM_043255070.1 mRNA downstream 3740 12613777 ~ 13074499 (+) False macrod2
XM_043255069.1 mRNA downstream 3741 12613778 ~ 13074499 (+) True macrod2
XM_043255071.1 mRNA downstream 524436 13134473 ~ 13158440 (+) True tasp1
XM_043255047.1 mRNA downstream 883782 13493819 ~ 13521130 (+) True jag1b
XM_043255055.1 mRNA downstream 949056 13559093 ~ 13563325 (+) True mkks
XR_006252318.1 other upstream 16990 12586886 ~ 12588853 (+) False mgme1
TU138047 other upstream 30631 12571631 ~ 12575212 (+) True G93296
TU137630 other upstream 1000991 11603697 ~ 11604852 (+) True G92977
TU137635 other upstream 1001619 11603697 ~ 11604224 (+) False G92977
TU137640 other upstream 1027984 11571660 ~ 11577859 (+) False lrrc9
XR_006252431.1 other downstream 606621 13216658 ~ 13216757 (+) True LOC122357146
TU138522 other downstream 1129570 13739607 ~ 13909603 (+) True G93613
XR_006252357.1 other downstream 1744079 14354116 ~ 14367135 (+) False frmd6
XR_006252421.1 other downstream 2496421 15106458 ~ 15226183 (+) True LOC122357077
XR_006252370.1 other downstream 2645037 15255074 ~ 15275234 (+) False fam135a

Expression Profile