RNA id: XM_043255108.1


Basic Information

Item Value
RNA id XM_043255108.1
length 6827
RNA type mRNA
GC content 0.59
exon number 36
gene id heatr5b
representative False

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 2012695 ~ 2037111 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTTCGACCGGCGTGACGACGTTCTCTCCGTTCATTGGCTGTAGAAGCGGAAGCGACGCGCCGTCACCCTTCCGCCGATCTCAATACAAACACTACACGGAGAGCAGCTCTCTGCCGCTGGAGTGCTGACCTCAGAAGAGAGCTGTCTGTCGGGATGGAGCTGGCGCACAGTTTGCTGCTGAACGAAGAGGCTCTGGCTCACATCACCGAGGCCAAGAGAGCCGTCTTCATCTTCGAGTGGCTCCGCTTCCTGGATAAAGTGCTCATAGCCGCCAACAAGGTGGATGTGAAGGAGAAGCAGAAGAAGCTGGTGGAGCAGCTCACAGGTTTGATCAGCAGCTCTCCCGGGCCTCCCACCAGGAAACTGCTGGCCAAGAACCTGGCGGTGCTCTACAGCATCGGAGACACCTTCACCGTCTTCCAGACGCTCGACAAGTGCAACGACATCATCAAGAGCAAGGATGACACCGCTGCGTACCTGCCCACCaaactGGCAGCGGTGGCGTGTGTCGGGGCGTTCTATGAGCGGATGGGCCGAATGCTGGGCAGCTCTTTTCCTGAAACCATCAACAACCTCCTGAAGGCTCTGAAGAGCGCAGAGTCTCAGGGTCGAGGTGAGATCCTGCTCAGTCTTCAGAAGGTGCTCAGCGGTCTGGGAGGAGCGGCGGCCTCCTGCCACAGAGACATCTACAAGAACGCCCGCTCCATGCTGACCGACCGCTCCATGGCCGTGCGCTGCGCCGTCGCTAAGTGTTTGTTAGAGCTGCAGAACGAGGCCGTGTTCATCTGGACCACGGAGCTGGAGAACGTGGCCACGCTGTGTTTTAAGGCTCTGGAAGGCTCTACGTACAGCGTCCGTGTGTCTGTGTCCACGCTGCTGGGAACCGCCATGGCCACCGCGCTCATGCCCAAGCAGGCCACAGtcatGCGTCAGAACGTGAAGCGGGCGACTCTGGAGGAGGTTCTGGAGCTGATGGCCACAGGCTTCCTGCGAGGAGGCTCAGGCTTCCTGAAGAGCGGAGGAGAGATGCTGAAAGGAGCCTCGGTCAGCCGAGAGGTGCGGGTGGGCGTCACCCAGGCGTATGTGGTGTTCGTCACGGCTCTGGGCGGTCAGTGGCTGGAGCGTAACTTCGCCGTGTTTCTGTCTCACCTGCTGGAGCTGGTGGCTCACCCCCGGGCCACGCAGACTCACGTGGAGGCCGTGTATTCCCGCCGCTGCGTGTCCTTCGCCTTGAGGGCGACTCTGGGCGGTCTGCTGGGGGAGAAAGCTCAGATAGCCGCTGCCAAGGAAATCTGCCTGGCCATCGGCAAACAGATGAAAGCCGTGGAGGCTGTGGTGAACGACCCCGCCAGCGAGGGCCGGGCCGGGGCCGCAGACGTGTCGGCCAGTCAGCACGTGATGGTGTGTGCTCTGAAAGAGCTGGGCAGTTTGGTCCAGAGTCTGAGCGCCACCGCTTCTCCTCTGATCCAGGAGCCGTCTGTCGGTCTGTTGGAGACGGTCAGCTCGGTGCTGCTTCACCCCAGCATGGCTGCTCGTCTGGCGGCGGCCTGGTGTCTGCGCTGCGTCGCCGTGGCTCTTCCTCATCAGCTCACGCCTCTGCTGGAGCGCTGCGCCGAGTGCATCAACAACCTGAAGAACTCTCCCGAGGCGGTGAGCGGCTACAGCTTCGCCATGGCTGCTCTGCTGGGAGGAGTACATCAGTGTCCTCTGGGCGTCCCGCACTCCAAGGGCAAGATGGTGGTGAGTATAGCCGAAGATCTGCTGCGCTCCGCCGCTCAGAACAGCCGTCTGTCTCTACAGAGAACTCAAGCCGGCTGGCTGCTCCTAGGAGCCCTCATGACCTTAGGGCCGTCTCTGGTGCGCTACCACCTGCCGAAGATGCTGCTGCTGTGGCGTAACGTCTTCCCTCGCTCTCAGAAGGAGCTGGAGGCCGAGAAGGCCAGAGGAGACTCCTTCAGCTGGCAGGTGATGCTGGAGGGCCGCGCCGGAGCCCTGTGTGCCATGCGCAGTTTCGTGGCTCACTGTCCCGAGCTGCTGACGGAGGACGTGATCCGCAGACTGATGACGCCCATCGAGTGTGCCATGACCATGATGTCTCATGTTCCTGCGGTGATCAAGGTTCACGGAGCTCATCTGAAGGCCAGCGCTGCCATGGTCCGACTCAGGCTCTACGACATACTGGCTCTGCTGCCGCCCAAGACCTACGAAGGCAGCTTTAACGCTCTCCTGAGGGAGCTGGTGGCAGAGTTCACGCTCACTGATAACTCGGCCAACACCACCACGTCTCTGCTGCGCTCGCTCTGCCATTACGACGACAGCGTGCTGATGGGCTCCTGGCTTCAGGAAACAGATCATAAGTCTATTGAAGATCAGCTGCAGCCCAACAGTGCGTCCGGCAGTGGCGCTCTGGAACACGACCCGTCCTCCATTTACCTGCGTATCCCCGCCGCCGAGGCCGTGCCCGGACCGCTGCCGCTCGGAGTGTCTGTGATCGATGCCTCCGTCGCTCTGTTTGGAGTCGTCTTTCCCCATGTCTCCTTCAAACACAGGTTGCAAATGCTGGATCACTTTGCCGAATGCATCAAACAAGCTAAAGGCGTCCGCCAGCAGGCCGTGCAGCTGAACATCTTCACCGCGGTGCTGAGCGCTCTCAAGGGTCTGGCTGAGAACAAGAGCAGTCTGGGCCCGGAGGAGGTGCGTAAGTCAGCCCTAGCTCTGGTGATGGGTGCGCTGGACAACCCCAACCCCATCCTGCGCTGCGCTGCTGGAGAGGCTCTGGGCCGGATGGCACAGGTTGTGGGAGAAGCGTCCTTCATCGCCAGGATGGCACAGCACAGCTTTGACAAGCTGAAGTCGGCGCGGGACGTGGTGTCCAGGACGGGTCACTCTCTGGCTCTGGGCTGCCTGCACCGCTATGTGGGCGGCATCGGCTCGGGCCAGCACCTGAAGACCAGCGTTAGCATCCTGCTGGCCCTGGCTCAGGACGCCACGTGTCACGAGGTCCAGACGTGGGCTCTGCACTCGCTGGCTCTGATCGTGGACTCCAGCGGGCCCATGTACCGGGGTTACGTGGAGCCCACGCTGTCTCTGGTGCTGACGCTGCTGCTGACCGTGCCTCCGTCTCACACCGAGGTGCATCAGTGCCTGGGCCGCTGCCTCGGAGCGCTCATCACCACCGTGGGCCCGGAGCTGCAGGggACCGGCGGCAGCATCTCTACGATCCGCTCGTCGTGTCTGGTGGGCTGTGCTATCATGCAGGACCACTCCGACTCTCTGGTGCAGGCCGCGGCCATCTCCTGTCTGCAGCAGCTGCACATGTTTGCTCCGCGACACGTCAACCTGTCCGGCCTGGTGCCCAGCCTCTGTgtgcaCCTGTGCAGCTCTCACCTGCTGTTACGGCGGGCCGCGGTGGCGTGTCTCCGGCAGCTGGCTCAGCGCGAGGCGGCAGAGGTCTGTGAATACGCCATGAGTCTGGCCAGGAGGGCCGGAGACGGCAAAGACAACACCAGCATCAATCTGAACATCACCGAGACCGGTTTGGAAGGGGTTCTGTTTGGGATGCTGGACCGCGAGACGGACAGGAAGCTGTGCTCGGACATTCACGACACGTTGGGTCACATGCTCTCGTCTCTGGCTGTGGAGAAACTCCCTCACTGGCTCAAGCTCTGTAAAGACGTGCTGGCGGCTAGCACAGAGGTCGGTGGGACCGTGGCGTCCGGTGGCAGAAggaaggaagaggaggaagactCCGAGAAGAAGGACGAGATGGATGATGACATCATGTTCACGTCACTGGGTCAGGATGACAAGTCCAAGCCGTCCGTGGCTCCTCGCTGGGTCACGCGGGTGTTTGCCGCCGACTGTCTGTGCCGCATCATTCATCTCTGTGAGAACGCAGACAAGGCCCACTTTGACCTGGCCGCTGCGCGCCTCGCCAAGCCAACAACCCCCAAGCGTGTGATTGGCCTGTACGTGACGAGAGTGTCGTCTGCAGGGGACTTCCTGGTGCTGCACTTGTGTGATCTGATCCGCATGGCCTTCATGGCTGCCACAGACCACAGTAACCAGCTGCGCATGGCTGGTCTGCAGGCCCTCGAGGACATCATCAAGAAGTTCGCCGCCGTGCCGGAGCCCGAGTTCCCGGGCCACGTGATCCTGGAGCAGTACCAGGCCAATGTTGGCGCTGCGCTCCGACCTGCCTTTTCTCCAGATACCCCCTCAGACATCACTGCCAAAGCCTGCCAGGTGTGCAGTGCGTGGATAGGCAGCGGTGTGGTCAGCGACCTCAATGACCTGCGGCGCGTCCACAACCTCTTGGTCTCCTCTCTGGATAAAGTCCAGGCGGGCAAGGGCCAGTCCAGCCAGCTGTACAGCGAGAGCGCCACTACCATGGAGAAACTGGCTGTGCTGAAAGCTTGGGCCGAGGTGTTCGTCGTGGCCATGAACATAAAGAAGGAGTCTCAGTCCATGCCGGCGCGTCCTCCGAAgggtgaggatgaggatgtgGGGGACGAAGGAGACGCTCTTCCTCCGGACAGCCTGATGACGTTAGTTCAGCCGGAGCTGCCGTCTCTCAGCCGTCTGTGGCTGGCCGTGTTGAGCGACTACGCTCTGCTCACTCTGCCTGCGGAGTTCTCCAGTCAGCTGCCGCCTGAAGGAGGGGCTTTCTACACTCCCGAGACCATAGACACGGCGAGGCTTCATTACCGTAACTCCTGGGCGTCTGTGCTCCACGCGGAGGCCTTGTGGCTCAGCAGCACAGGCTTCGGTTCGGCTGAAGACTCTGTTGAGGGCAAGACTGCTCCCGTCACAGGAACTGTAGTGACTTCTGCTCCCGGCAAAAACACAGATGACCTAGTGAAGGACAGACTGCACCTTCTCTTGGGCATCAGTATTGAGTTCCTGTGTTTCCCTCGGGCCGAGGAGCCCATCGAGGATGTGATGTCGTGTCTGTTTGCCCTCTGCACACTGCTGGACTCTCCTAGTGCTCGGACACACATCGCAGAGGACCAGtTGCTGGCTGTGGAGCTGCTCAATGTGCTTCACCGGCTGCTGTTAACACGTGACCCTCCCAGCGTCCAGCTGCAGGTGACCACACTTGTGCAGAAAACCATTCGCGCTGCCCAAGAGCATCTGGAGCATATCAGGAGCAGCAAGACTGATGAGGAGTGTGTCGGGGAAGGAGGAGAAACCGGAGAGCTGCTTCCAGGGAAATCTCTGGTGTTTGCTGCGATGGAGCTGCTGGTTTTTATCTTGGTGCGTCACCTGCCTCATCTAAAAGCTAAGGACGCAGACGGCGTTAGACGAGCTCCTCAGCACCTGTCTGACGACAGCAACCGTCTGGTAGCAGCCACGATCACGGCCCTCGCCGAGCTGCCAGCGCTCTGCTCTCCTGCAGGGAGCATGACCATCCTGCCCACGGTGCTCTTCCTGATCACTGGTGTGCTGAGAGAGACGGCGGTGAAGACGTCTGATTGCTCAGTCCCTGTGCCCGTGTCTGCGGCTCTGCAGGCCATCAAAACCATCTTGAGCTCTCCGCTGGCCCCCAGGAGCCAGACGCAGTGGAGCGCGCTGGTCAGGAGCAGTCTGGCCACCGTCCTGGAGCACTCTCAGCCAGACGCGCGCGGGGCCGGCGTGGATGAGGTCAGTCTGCTGACGGCCATCACGTTGTTCCTGCTGTCGGCCAGCAGTGAGCTGCTCGGCGTCTCCGTCCTGCAGAAAGGCTGCATCGAGCGCTTCAGACACGGACTGGACTCTGCTGACCCCTGGACTCAGGCCCGCTGTTATCAGCTGCTGCTGTCCGTCTTCCAGCACTCGTGTCGCAGTCTCTCCACCCCCTACATCCACTCGCTGGCTCCGGTGCTGGTGGAGAAGCTGAAGGCCGTCGAGCACAACCGTCCGTCCGCTCCTGCTGAACTACAGGCTGTGCAGGAAGGAGTTAAAGTGTTGGAGGGCCTCGTGGCCATGGGAGAAGAACAGAACCGAGTTCAGTTGCTGGCTCTGCTGGTCCCGACCCTCATCTCGTACCTGCTGGAGGACACCACCTTCTCCACGGCCTCCAGCTCCTCTAAAGGCCTGCATGAGTTTGCCCTTCAGAGCCTGATGCACACTGGTCCCTTGTACCCTGCTGCCTTCAAGACGGTTATCGGAGCGGCACCTGAACTCAAGACGCGTCTCGAGGCGGCCATCCGATCCAGACAAGCCAACAGTAAAGCCAAGACTGCAGCCAGACAAACACAGCCGACTGTCCAAGCGGCTCCCACCATCAAACTCAAGACCAGCTTCTTCTAGCCGCTGCTTCAGTCAGTAAAGGTTAAAGAGACATTGTCGTAGGCTTCGGGTCTGTTACAAGCTTTAGTGCatcttctttgttttttggGCACTTTTGAAATGCACCTTAAATACACGTAAAATCTAAATGAAGAACTTCTTTTTCAAAGCTCACATAACACAGGTGGAAAATGACTAAATTCCCATTTACCTGAATATTTAATTGATCACATTCCcatgttttttgttcatgttctgcaatgttgtgtgtttgtttgttttttaattataatttaaatcaaCTTTTTCAAAGATTGTGCTTGTGATTTTGGTAACTGATGAGCATTGTTTTAAACTACTGTCTAGATTATTGAAGGTGTAAACTACTTGACTTGTGCTGTGGATGTCAGTGTATACAGAACTTATCagaagtttttaatgttttgcagtCTGTAGgtatgttgtatattttagGTTTCGTTTGagctttttaatcatttcatcgCAGTGTCTGTATTTTGCTGTGTATTCCTAAAGTAAAACCGTATGATACATAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU133360 lncRNA downstream 105157 1907316 ~ 1907538 (-) True G90078
TU133358 lncRNA downstream 125086 1887406 ~ 1887609 (-) True G90076
TU133356 lncRNA downstream 140963 1871381 ~ 1871732 (-) True G90074
TU133344 lncRNA downstream 233166 1778464 ~ 1779529 (-) True G90064
TU133343 lncRNA downstream 241096 1770764 ~ 1771599 (-) False LOC122356490
XR_006252336.1 lncRNA upstream 14920 2052031 ~ 2054891 (-) False LOC122356492
XR_006252337.1 lncRNA upstream 14920 2052031 ~ 2054891 (-) True LOC122356492
TU133453 lncRNA upstream 16646 2053757 ~ 2053960 (-) True G90150
TU133475 lncRNA upstream 113206 2150317 ~ 2166300 (-) True G90166
TU133479 lncRNA upstream 115476 2152587 ~ 2155188 (-) True G90168
XM_043255188.1 mRNA downstream 1301 1997355 ~ 2011394 (-) False efemp1
XM_043255187.1 mRNA downstream 1301 1997355 ~ 2011394 (-) True efemp1
XM_043255189.1 mRNA downstream 2816 1997355 ~ 2009879 (-) False efemp1
XM_043255153.1 mRNA downstream 92070 1899037 ~ 1920625 (-) False vit
XM_043255160.1 mRNA upstream 23189 2060300 ~ 2074778 (-) True nvl
XM_043255159.1 mRNA upstream 23190 2060301 ~ 2074774 (-) False nvl
XM_043255117.1 mRNA upstream 56364 2093475 ~ 2146596 (-) True slit1a
XM_043255230.1 mRNA upstream 402095 2439206 ~ 2457063 (-) True LOC122356487
XM_043255138.1 mRNA upstream 421769 2458880 ~ 2466266 (-) False LOC122356433
TU133318 other downstream 320760 1684449 ~ 1691935 (-) True LOC122356758
TU133116 other downstream 455692 1556169 ~ 1557003 (-) False LOC122356439
TU132509 other downstream 1835375 123194 ~ 177320 (-) True G89543
TU132495 other downstream 1944819 67327 ~ 67876 (-) True G89537
TU132489 other downstream 1963896 47522 ~ 48799 (-) False LOC122356184
TU133469 other upstream 114726 2151837 ~ 2245078 (-) True G90161
TU133689 other upstream 547085 2584196 ~ 2585331 (-) True G90304
TU133704 other upstream 589217 2626328 ~ 2627157 (-) True G90311
TU133931 other upstream 953307 2990418 ~ 3021862 (-) True G90445
XR_006252267.1 other upstream 2635855 4672966 ~ 4689168 (-) False LOC122356061

Expression Profile