RNA id: XM_043255343.1


Basic Information

Item Value
RNA id XM_043255343.1
length 1322
RNA type mRNA
GC content 0.40
exon number 2
gene id mettl18
representative True

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 11531855 ~ 11533395 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATTGAAAAGATCCGACTCAAAAGAACAGTTCGTTCGGGACTAAAGATAGCAGATGTTTGCACGTGCTAAGTCACCGCGTGGGTCAGAATGGTATGAGAGATGGCATTCAGTTTCAACTTCGATATTCCTTTACAGACAGACGAGACAAAcgataaagaaaacaaagacgACAAAGCAAAAGAAGTGGATCTTAAGGGCACGgAAGTCAGTGCAACCGTTGCAAAGAAGATAAAGGATGCTGTGGAGCACCAACCTTTGTTGGATCCTTTGTCTCAGATTGAGAGCTGGGTGCCTGAAACCATAACCATAGGTTCCCTTCCTCCCCTGCTCTGTCTTAATGAATCGGTTTTTGAGAAGACTGCTCCTGAACGTGATGACAGTGAGGAGATACTGGCCAAAACACTGACTCAAAACTCAGACCTTATCTCTGGAGTCTATGAGGGTGGACTTAAGATATGGGAATGCACTTACGATCTACTTGAGTACATTGATGATGAAGGAGAGACCTTCGCTGGGAAAAGAGTGTTAGACTTAGGCTGTGGAGCAGGTCTACTTGGTGTACTTGCATTGAAGATTGGAGCCAGCAAAGTTGACTTCCAGGATTATAACAGCACTGTGATAGAGCAGTTAACAGTGCCAAACGTTTTTCTCAATTGTGAAGATGAcgaaaatgaagagaaaaacagcagccCACCATGTAAGAGAAAAGCCCTGAATACAACAGAGGAATTACTAGATCGTTGTGGTTTCTTCTCAGGCGACTGGAACTCTTTTCTCAcacttttgcaaaataaaacccCACCACCAAAATATGACATTATCTTCACATCAGAAACCATATATAACACAGACTACTACTCATCACTTCATAATGTGTTTTGTGACCTGCTTGATGAGAATGGTATTGTTTATTTGGCAACCAAATCTCACTATTTTGGAGTAGGAGGTGGCCTTCATCTGTTTGAGAAGTTTGTGGAGCAGAATGATGTCTTTCAGATTAGGCGTTTAAAGGATGTGGAACAAGGCCTTAAGAGACATGTTGTATCATTGACATTCAAAAAGTGACATTCAAATTGTATTTAGAATAATGTGCCTATTCAGTTATGGTGCAAATtaccataaaataataattcacattgTTTTTAAGACAAATGGACTGGAGATCCTAAATTGTGCTTGGTTTGAATAACTTGAAACAACAAGAGCACCATCACGGAAACTGGAGTGTGGTAAAACACTGAAGATTTGTTAAAGTCAGAGTTCAATCTGtaataaaacactgcaaaacCATCATCAAATAAACAAGAGCTGACGTAAGTTTA

Function

GO:

id name namespace
GO:0008168 methyltransferase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU137606 lncRNA upstream 2775 11525357 ~ 11529080 (+) True G92965
TU137599 lncRNA upstream 12512 11518620 ~ 11519343 (+) True G92962
TU137585 lncRNA upstream 21967 11509238 ~ 11509888 (+) True G92952
TU137548 lncRNA upstream 69739 11414223 ~ 11462116 (+) True G92923
TU137550 lncRNA upstream 140866 11390739 ~ 11390989 (+) False arhgap22
TU137616 lncRNA downstream 9658 11543053 ~ 11558240 (+) True G92968
TU137626 lncRNA downstream 32635 11566030 ~ 11618812 (+) True G92974
TU137632 lncRNA downstream 70302 11603697 ~ 11604159 (+) False G92977
TU137645 lncRNA downstream 94964 11628359 ~ 11628566 (+) True G92984
TU137667 lncRNA downstream 194428 11727823 ~ 11728484 (+) True G93001
XM_043255618.1 mRNA upstream 23916 11486772 ~ 11507939 (+) True antxr1d
XM_043254670.1 mRNA upstream 50859 11477208 ~ 11480996 (+) True gdf10a
XM_043254615.1 mRNA upstream 77144 11444433 ~ 11454711 (+) False ptpn20
XM_043254616.1 mRNA upstream 77144 11447557 ~ 11454711 (+) False ptpn20
XM_043254613.1 mRNA upstream 83931 11428384 ~ 11447924 (+) False ptpn20
XM_043254710.1 mRNA downstream 7727 11541122 ~ 11557216 (+) True tdrd9
XM_043254711.1 mRNA downstream 7727 11541122 ~ 11556025 (+) False tdrd9
XM_043254959.1 mRNA downstream 44267 11577662 ~ 11592600 (+) True lrrc9
XM_043254805.1 mRNA downstream 60770 11594165 ~ 11602678 (+) False pcnx4
XM_043254803.1 mRNA downstream 60927 11594322 ~ 11602678 (+) True pcnx4
TU137330 other upstream 313680 11215492 ~ 11218175 (+) True G92772
TU137332 other upstream 316768 11213526 ~ 11215087 (+) False G92772
TU137252 other upstream 562941 10964873 ~ 10968914 (+) True eif4ebp2
XR_006252423.1 other upstream 1112261 10418822 ~ 10419594 (+) False ly6pge
XR_006252428.1 other upstream 1202576 10329144 ~ 10329279 (+) True LOC122357143
TU137640 other downstream 38265 11571660 ~ 11577859 (+) False lrrc9
TU137630 other downstream 70302 11603697 ~ 11604852 (+) True G92977
TU137635 other downstream 70302 11603697 ~ 11604224 (+) False G92977
TU138047 other downstream 1038236 12571631 ~ 12575212 (+) True G93296
XR_006252318.1 other downstream 1053491 12586886 ~ 12588853 (+) False mgme1

Expression Profile