RNA id: XM_043255348.1


Basic Information

Item Value
RNA id XM_043255348.1
length 6701
RNA type mRNA
GC content 0.43
exon number 21
gene id inpp5f
representative True

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 9457557 ~ 9473534 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATAGTGTTTTACTTGGCACTTGCTACGCGAATACAAAATAACATGAACAtgattcaattacattttttgtgaaataaagcCAAACTTGTAGGCGTCGCACAATGCTCTTTTTCGTGATATCGACCTTAAATTTGTAACATTGTCATTTGCAGATGTACCGGCTTTGCTTTTCCCAgcttatatttcatataaaacttGAAAATAGTATTTGCGCGCATTTGCAACAGTAAACTCACTTTTATCTAACACTaaacaagtttcactttttataGCTACTTTTTCACTTTAATCTTCCGCAATAATCTGCCAAGTGTGGTCCTTAAAAGGACACGAGCCTTAAGTCTGTGCTCCAAAGCCCCCAAGGTTTACAGTTTAAGTTGTAAATgtcatttagtcatttgttGCACGACAATAATactcaaaaacataattaatttgcGCACACTGATAGCCatacttattttaattgatttagaCCCACATAACTAATTTATCTAGAATAATGCGTaacaatgtttatatatatagtattatattattgaaTCAGGTCATCGGTTATGTGTGTGTCTCCACACTAGAGTCGCAAAATAACAATCtaacataaaacaatacatgAAAACAAGTACTGCAGGTGGGGCATCTCAGTCACAGATGAAGTATGATGTTCGGTGTGACGGAGGAAGTCACGTGTGTGTATAACTGGAGGAAATTGTTTCAGTCGCTGCTGCTCCCCTCAGTGGAAAATATTAGACCGACCGGCACATTTCCTAACCACAGTATCGCCCTTCTTAAACTGACATTAAATGCACCGACGATTCATTTTCGAGGATCGACCAGTAGCTGACACAGAGACACGATGCTTTATATGATTACAAACGTTTACTCAAGTACACAGCTAGCAGGTTAGCTGGCGTCTGTTGGGATTGCCAGTGGACGAAAAGAGAGCCGCTTCATTTCCTCGTTTCACGGATCGGGAACGAATCCAGCGGTGTGGTGTCGGGAGGCTCGTATGTTTCGGTGTTTCGGTGAACATGGAGCTGTTTCAAGCTAAAGATCATTATATTCTCCAGAGCGGAGATAACGCGCTGTGGTGCAGCAGGAAGGATGGATCCATGGCCGTGAGACCGGCAACCGATCTGCTGCTAGCATGGAATCCTGTCTGTCTGGGACTTGTAGAAGGTATTATTGGAAAAATACAGCTTCATGCCGATCTTCCTCTGGGCCTGATTCTGATTCGCCAGAAAGCTCTGGTGGGCCAGTTGCCAGGAGACCATAAAGTCTACAAGATCACTAAGATTGTAGTCATTCCACTCTCAGAGGATGAACCACAGGATCTGGAATTAGAGCTCTGTAAAAAGCATCATTTTGGAATCAACAAACCGGAGAAAATCACCCAGTCACCAGACGAGTCCAAGTTTCTGATGAAGACTCTGAGTCAGATCAAATCTAATGTTGGCGGTCCCATCAAAAAAAAGTATTCCCCTGCCTTTCAGGTGAAAGAGAATAAAGAGAAGGAACGTCTGGAGAGGCGACTGCTTGATGAGCTCTATAAGATATTCATGGACTCGGATTCATTCTACTATAGTCTGACCTATGACCTCACCAATACAGTCCAGCGACAGGGAGAGTTAGGCAAGTCAGATCAGTCCTTGTGGAAAAAGgtgGATGATAGATTTTTCTGGAACAAGCACATGATCAAAGACCTCATCGACTTGCAGGTGCCTCAAGTGGACTTCTGGGTAATTCCTATCATCCAAGGCTTCGTTCAGGTGGAGGAGCTGGTGGTGAACTATAACGAGAGCTCTGATGAAGAGAGGAGCAGTCCGGAGACACCCCTGCAGGAGCCCACCTGTGTGGATGATATTCACCCACGCTTCACTGTGGCCCTCATCTCCAGACGAAGTCGCCACCGTGCAGGAATGCGCTACAAGCGGAGGGGGGTGGATACCGACGGACACGTGGCCAACTATGTGGAGACGGAGCAGCTGATCCACGTGCACAGTCACACGCTGTCCTTTGTACAAACTCGAGGCTCTGTTCCTGTGTTTTGGAGCCAAGCTGGGTATCGCTACAACCCCAGACCTCGGATAGAGAAAGGCGAGAGGGAAACTATGCCTTATTTTGCATCTCACTTTGAAAAGCAAGTTCAGATTTACAAAAAACTGGTGATCATTAATTTAGTAGACGCAAATGGACGCGAGAAGATGATTGGAGATGCTTACCTCAAACAAGTGCTGCTGTACAATAATCCCAATTTAACATACGTTTCATTCGACTTCCATGAGCACTGTCGAGGGATGAAGTTTGAGAATGTGCAGACTCTCACTGATGCCATCTCTGACATTATCACAGACATGAGATGGGCCTgGGTGGACCAAGCAGGAGTCATTTGTCAACAAGAAGGCATCTTCCGGGTAAATTGCATGGATTGCTTGGACAGGACTAATGTGGTACAGGCAGCTATCGCACGTGTGGTCATGGAACAGCAGCTGAAAAAACTTGGTGTAATGCCACCCGAGCAGCCACTGCCCCTCAAGTGTTACAGGATCTATCAGGTGATGTGGGCCAACAACGGAGACACCATTAGCCGTCAGTATGCTGGCACAGCTGCACTAAAGGGAGATTTCACACGAACAGGAGAGCGAAAGTTAGCAGGCGTGATGAAGGATGGTGTGAACTCAGCTAATCGTTACTATCTGAACCGCTTCAGAGATGCCTACCGACAGGCTGTCATTGACCTCATGATGGGTCTTCCAGTAACAGAAGACCTGTACTCCATCTTCAGCAAGGAGAAAGagcaggaggagaaagagagggagagccAAAGAGGAGCTCAGGAACAGGTCAGCCTCCTGCTGCAGACATACATGCAGCTGCTGCTGCCCGATGATGAGAAGTTTCACGGCGGATGGGCGCTTATCGACTGTGATCCAAGTTTATTGTCAGTGGCTCAGAGTCTTATAGATGCCACTCACAAAGATGTTGATGTTCTTCTGCTGTTGTCCAACTCTGCATATTATGTGGCCTACTATGATGAGGAGGCGGACAAAGTTAACCAGTATCAGAGACTAAGTTTAGAAGGACTTGAAAAGATCGAAATCGGTCCAGAACCGACTCTTTTTGGAAAGCCTAAATACTGCTGCATGCGGCTGCACTATAAGAACGGGGATATGAGTGGTTACTTCCATACACTGAGGGCTGTCACTCGAAATCCAGAAGATGACGGAAAAGACACACTCCAGTGCATTGCGGAAATGCTTCGTATTACAAAGCAAGCTATGGGGCTTGACGTCCAGGTTGTTGAGAAGAAATTagagagGAGACACAGCAAACCGCACGAGGATATAATGGGAATACAAGGCAAAGCCGTGGACCAAGTCCTTGGATCTGGTTTGGCTCAAGGCAAAAGTTTCCTTTTGAACAAGTTTTCAACACTTAACCAGAAAGTAAAGCAGACAAAGACTAACGTCAACATTGGAAACTTCAAGCCCTTGGGCAAACTAGGGACCTTCTCGAAGCCTGAGGTAAAAGTGAACTTCCTCAAGCCAAACTTGCATATGAACCTCTGGAAATCTGACAGCAGTTTAGAGACTCATGATGGCAACACTGGTTCAGCAGCCCTGAAAAACCTTAATGATGAACATTCAGAGGAGATTTCCTCAGATTCTGATTCATACAACTCGGATGAGCAGCCTTGCTCGGGCTCTCGGGAAAACGTAGACTATGTGCTTCCTAGCTGTGGAATTGTAGCATCTGCACCACGACTTGGCAGTCGCTCGCAGTCAATTGGCAGCGTCGAGCTTGCGGTGCCCTCTGTCATCCGAGTCACAGGCTGTGATGAAAAGACAGCAGATAGCTTGTCAGTTGGCCCGGATGGCCAGTCTCCTGGGTCTGCCTCGGTGGCTGAGGAAGCCATTCTGATTGACTTTGGGACACCTATCGAAGCTTACTGCCACCAATTCGTCCAGGATGCCAAGATCAAACCAATAGAGGTCTTTGAGGAAGTGGCTCCAGCACCCAAACCGCAAGGGCCTCAAGCCCCCTCAGCTCCAGATGCAAAGCTGGGGTCTTCACGTTCCCAACAGCAGCTTCCTCGCCCATCTCAGCTTGAGGTAGAGTCCTCCGTCCATGGGACAAATCTTCTGACTGTTCAGCCCTCAGGGTCCGCCACATCGTGCGGGTCACAAAAGAGCCTGGAAGGCATCACAGGACCCTCCCCTGCAGACAGTAATGGAAGCCGAGTTGTGTCGCCCTTCGCAAAGATCAGGAGCTCCATGGTGCAGGTGGCTAGTTTGACCCAAGCTGGACTTACCCAAGGCATCAACTTTGCTGTAGCAAAAGTGCAAAAAAGCCCGGAGCCAGACGCTGTCAACGAAACCCAAGAGAACGAATTGCGAGCGATGTTTACACAGTGCCAGACCAGGATCATTCAGATATAGTGTGCTTAGCGGATGTATTATTAGCATTAGATCGTGACTTCCAGTACAGTAACGGTAGCGTAAGCTCACAAAAGTCAGACCACACTCTTATTTTTCCCTCCAGTTAACCGAACCAAAGTTTACAGCCAGTGTTGAGTAGTAAGTAGTACGAATAACTCGACCAAGTCGAATCCTAAACATCTCTATATTGCTGGTTTGCATGTTAGGAAGTAACCCTGAGGTAGATTAGGACAGGCAAGTTTTATTGCATGTCGAGACCCAAGACCTAGGTATGTCACGTGACCCCATTTGTGCGGTGAAATTCACTGGCTGTCGTAGCTCTAACTAAAACCTTTCCCAATTGGAATATCTATCAGTGGGCGGCTTAATTATTTCACATTAGAGAACCAGACCGTACAGTTATATGGATATCTTTGATGTGGTGTTTGTCataaaaatataccaaaatagGATCAGAGTAGTTGTGTAGGATCTATGGtcaaattatattattcaaCTGTAAAAAGTATTGTATGTAAGTACTGTAGCAGTTTCCCTTAGAACTCTCCAATTAAGATGTTTATAGACAGAGAATTATATTTACATGCTCCTAAGTTTATAATCATAACTGACGGAAACAAGATGCCTCTGTTGATCCAATCACGCAGCTAAATCATTCTGtcaaacaaaatgtttgttcCATAGCATTAGCAGACGACTCAAAACAGCTATTTATTGTCATACGTTTATTTTAAGAAAGGCGTACGTCTTAAAATTTGTTGCATATGTCTTATTTTTCAGTTGTATGCGATGGGGTAATGTAACGGTGGTCTGCTGATATCTTAAAATGCTCTGCCTGTACATTGTTGGACGTTCatatgcagatatgactggttttgagtatctgtaaaaaaacctcaaattaattatttgcagTTACTGGACCTCCGTATGCACATGACTTTTGACTGGTATTTAGCACAGGTCCTGCAAGGTACCCACGGTAATCAACGTTTTGCACTCTTAAATGGCAAGAGCAAGCCTTATCAAATTGCTAAATGCAGGTTTTTGACAAGTCTACCTAttaatctgttttcatttaGGTTACATTCTCTCTTTAATATCTATGTCTTTAGATTCACTTTGGCTTGAAGGTCATTTGGTTCAAAATTGAGAAGTGATTAGATGATGTTTCGAAGTCTTACCGTATTTGTTctagatttgtaaaaaaaatatcaagccTTGTTGGGTGATATCTGGTGGATCCTAGTTTAATTATGCATTAGTTGTTGTTTAAGTGCAGATCCTGTGGGATTGATCTTTGGGTATCAAGAGATGCTGAAATAGTTGAATATCTTATGGGCTATATAATATCAAAAGGTCTGAATAAGACACTGTGATCTCATGTGAACATCAATAAGAGCATAATATTGGCTTTTTGAGCTGGTTTATCCATTCTTTGGGCCACAGTTAGCTTTTCAAACCCACCATGAGCTTTGTTTCTCACGCGTCATTTCTTACTCGTCCCTCTCTCACATATACTGTAGCATGGAGTGCTGTGCAAGGCAGTGGGTTACACAATGTTTTTGACATTCCTGGAGCTGCTGGTACGTGGTTTTGATAAGCTTCCGAGATTGGAACTGTCTTGAGTTTTAATATATGGTGGCTGTTATGCAACAGTGATAAATACATGCGCAGTAGTTTTGGtggtaaactttttttttttttttttttttttttttaactatttaagaTGGCATGCACTGGACTGCACTCTGTTCTTTGCTTTGAACTGCAAACTGTTCTTCTTTAGCAGAGGTTTATGCTGAGGATCTTGACAAACATTCCTCTTGTTTTTGGAGGTGGGGTGGATTATGTTTTTGGTTAtgtatgaatttttaattttctatgcATAAAGACTTGCACTGTCCTTTGTGGTTGTTCCCCGAACATCTTGCAATTTGTCACAAAGTGCTTTTGAATCCacgttttattttcaatatttgtaACTGAACTGACATGTATCGTACAACATTTTGTCTAACAGTCTTGTTTGTAAATCACGTTCAGCTTCTTCCTATTTGAGAGAACGTTGTCCTCCATAAATGTTTGTGAATTGTTTTCCATTCTATTCAACATTTTATTGCAgagtatttattcaaaattcatgTTCTCAAGCTTATTCCCCAGTATTTTcctatgttaataataatgtaaactgctgtattttaaaatgttatgggATGTGCCTGAGAggatttttaagtaaatatttaaacaaaa

Function

GO:

id name namespace
GO:0042578 phosphoric ester hydrolase activity molecular_function

KEGG:

id description
K21798 SAC2, INPP5F; phosphatidylinositol 4-phosphatase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU136646 lncRNA upstream 6868 9450446 ~ 9450689 (+) True G92313
TU136465 lncRNA upstream 22961 9430178 ~ 9434596 (+) False atoh7
TU136467 lncRNA upstream 22961 9430178 ~ 9434596 (+) False atoh7
TU136420 lncRNA upstream 181858 9264064 ~ 9275699 (+) True G92147
TU136362 lncRNA upstream 313046 9140217 ~ 9144511 (+) True G92111
TU136670 lncRNA downstream 5887 9479421 ~ 9479752 (+) True G92334
TU136663 lncRNA downstream 97455 9570989 ~ 9583070 (+) True LOC122356835
XR_006252391.1 lncRNA downstream 109021 9582555 ~ 9583671 (+) False LOC122356835
XR_006252390.1 lncRNA downstream 109097 9582631 ~ 9583671 (+) False LOC122356835
TU136704 lncRNA downstream 118885 9592419 ~ 9594277 (+) True G92361
XM_043254628.1 mRNA upstream 649 9451180 ~ 9456908 (+) True bag3
XM_043254627.1 mRNA upstream 13849 9436681 ~ 9443708 (+) True pkd2l1
XM_043254742.1 mRNA upstream 22952 9430203 ~ 9434605 (+) True atoh7
XM_043254743.1 mRNA upstream 22952 9430203 ~ 9434605 (+) False atoh7
XM_043254744.1 mRNA upstream 25955 9430178 ~ 9431602 (+) False atoh7
XM_043255605.1 mRNA downstream 8677 9482211 ~ 9491406 (+) True LOC122356643
XM_043254617.1 mRNA downstream 76199 9549733 ~ 9552495 (+) True pcbd1
XM_043256233.1 mRNA downstream 94083 9567617 ~ 9568527 (+) True neurog3
XM_043255010.1 mRNA downstream 141493 9615027 ~ 9667838 (+) True bcl11aa
XM_043255819.1 mRNA downstream 577553 10051087 ~ 10067172 (+) True fancl
TU136388 other upstream 293443 9161561 ~ 9164114 (+) True zgc:153981
TU136262 other upstream 717468 8739073 ~ 8740089 (+) False sf3b5
XR_006252358.1 other upstream 774505 8666268 ~ 8683052 (+) False pcnx2
TU135961 other upstream 1146733 8306486 ~ 8310824 (+) True G91833
XR_006252298.1 other upstream 1576074 7858698 ~ 7881483 (+) False zswim8
TU136946 other downstream 762382 10235916 ~ 10249725 (+) False LOC122356813
XR_006252428.1 other downstream 855610 10329144 ~ 10329279 (+) True LOC122357143
XR_006252423.1 other downstream 945288 10418822 ~ 10419594 (+) False ly6pge
TU137252 other downstream 1491339 10964873 ~ 10968914 (+) True eif4ebp2
TU137332 other downstream 1739992 11213526 ~ 11215087 (+) False G92772

Expression Profile