RNA id: XM_043255552.1


Basic Information

Item Value
RNA id XM_043255552.1
length 1534
RNA type mRNA
GC content 0.42
exon number 4
gene id mtres1
representative True

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 12101973 ~ 12104666 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GGGCGCTGTAAAATGTGCGCCACTACAGCAGCAGCGACTGCTGGTTTGTTTTTACTGTGCTCGTTGGTCAGCTCGAGATTAGAGTCAAGGGGAGATCTCTGAAGTCACTTAgtgtcacaGTATGCAGAGTCTGTCAGTGCAGGCTCTGGCCCTGCGGCAGCTAGGCAGACTGAACTCCCTGCAGCTGCTCACACCGTGCCATGCCTCTTGTCTCAGCATGTGGTGCCCTCGAACATTGCACGCGCGTCAGCTGTGGGGTTCAGCCGCACCCCAGACACACCGGACAGCTACGTGGCCGAAATCATGGGACACTCGGCAGAGCTGGTTGCTCCATCACACCCGGCTCAAGAGCAcgagaaagaaaggaaagcaAAAAGCCAGTCAGCAGGGGGAGGACGAGGAGGAACAGGAAGATGCAGAGGCTAGTGACTATGAGGATGAGCTTCCAGATGACCCAGGTCTGCCAAAAGACTACAAAGACCACAAGAAAACTGTCCAATCTCTTCGTTTCGATCTGGTTTTGAAGACCGGATTGGACACTGCACGAAATAATGTGGAGGATGCTTTCTATAACCTCAAGTTGAGACTGAATGGTCGGAAACTCACTAAGAAGAGTAAAATGGTTAAAGTGGGGGATACACTGGATCTAATCCTAAATGAGGACAAGGAAATGGGCACAGTCTTGCTGAAGAGAGTGATCTTGAAAAAGGTGGTTGGAGAGACAAAAGATGGAGAAAAGCAGAGAGTCATTCTAAGAACTTGGAAACATCTACAACTTCCTAAACATGATGTGCACAAGCAGTAGTCTGTTAGCAGACTAACAGACATCTGTGATGTGTTTGAGAGGTGAAGGATCAGAAAACAGGACACTGATATTTCCTATTTCCCTTTCCATCCATTTGATTCTGCATCTGCAGATTAAGGATTTAATTGGTTGCTTTCCATGCCCAACAAAAACTGAAGGTCTTTCTCACATCTTTTCACTCAACAGTAGTTCTCATAAATGttgtattaaagtttttttttttaaattaactttacaGATCACAAATGGAACACAAATGCCACCTATTGTTTAGAGGTGGTTTTGGttgtatgcattttttcattattgtttttttatatatttactagAGTGACAAAATAACATTGTGGGATGAATCAGCTAGTGTTTGGGATATCAACTGTTTTCTGACACCTTATTTAGTTGTCATCATTGTCTTTATGACATTGGTAAATTTCCAGTGAGAATTTTCATACAGGATACAGAATGCCTTTGCATACAAGATTACCAGACAAAAAAGGGACATTAAAAGGTTTTTGCAGAGCatttatgcaacaaaaaatgttaaaacccAAACACCCAAATCttacttttttcttcattataatGGTCATTGATAGAATTTACAAAGAACAAATTTATTCtcgaaaaacataaaatcttcCCTTAGGTATATTCTTTGACTGTAAAATGCTCCTATTGACCTTCACTTGTGAatctgaagtaaaataaaaaggaacatGAAACCCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU137865 lncRNA upstream 1618 12099606 ~ 12100355 (+) True G93167
TU137864 lncRNA upstream 2747 12098694 ~ 12099226 (+) True G93166
TU137844 lncRNA upstream 22071 12077637 ~ 12079902 (+) True G93153
TU137801 lncRNA upstream 294727 11807028 ~ 11807246 (+) True G93113
TU137672 lncRNA upstream 343364 11751939 ~ 11758609 (+) True G93006
TU137867 lncRNA downstream 67 12104733 ~ 12107484 (+) True G93169
TU137897 lncRNA downstream 17273 12121939 ~ 12178466 (+) True G93182
TU137908 lncRNA downstream 76203 12180869 ~ 12184800 (+) True G93191
TU137907 lncRNA downstream 81402 12186068 ~ 12189038 (+) True G93190
TU137921 lncRNA downstream 98076 12202742 ~ 12267066 (+) True G93200
XM_043256199.1 mRNA upstream 70077 12029451 ~ 12031896 (+) True rdh14a
XM_043256198.1 mRNA upstream 72814 12024402 ~ 12029159 (+) True LOC122357022
XM_043256201.1 mRNA upstream 77682 12022560 ~ 12024291 (+) True LOC122357024
XM_043254599.1 mRNA upstream 220096 11875804 ~ 11881877 (+) True osr1
XM_043256273.1 mRNA upstream 377613 11712438 ~ 11724360 (+) False hif1aa
XM_043256336.1 mRNA downstream 39972 12144638 ~ 12172343 (+) False sobpa
XM_043256338.1 mRNA downstream 39972 12144638 ~ 12172343 (+) False sobpa
XM_043256334.1 mRNA downstream 39973 12144639 ~ 12172343 (+) True sobpa
XM_043256335.1 mRNA downstream 39973 12144639 ~ 12172343 (+) False sobpa
XM_043256337.1 mRNA downstream 39974 12144640 ~ 12172343 (+) False sobpa
TU137630 other upstream 497121 11603697 ~ 11604852 (+) True G92977
TU137635 other upstream 497749 11603697 ~ 11604224 (+) False G92977
TU137640 other upstream 524114 11571660 ~ 11577859 (+) False lrrc9
TU137330 other upstream 883798 11215492 ~ 11218175 (+) True G92772
TU137332 other upstream 886886 11213526 ~ 11215087 (+) False G92772
TU138047 other downstream 466965 12571631 ~ 12575212 (+) True G93296
XR_006252318.1 other downstream 482220 12586886 ~ 12588853 (+) False mgme1
XR_006252431.1 other downstream 1111992 13216658 ~ 13216757 (+) True LOC122357146
TU138522 other downstream 1634941 13739607 ~ 13909603 (+) True G93613
XR_006252357.1 other downstream 2249450 14354116 ~ 14367135 (+) False frmd6

Expression Profile