RNA id: XM_043255671.1


Basic Information

Item Value
RNA id XM_043255671.1
length 6368
RNA type mRNA
GC content 0.42
exon number 26
gene id ide
representative True

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 16448734 ~ 16469493 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

agaaacaggcgGACAGCTGGACGCTTAAATCAGAGGTCTTTTTAAATACTCAAAGTGCTTGCTGCTAAACCTGGACGTGGGTGTGGCCTGTTTCGTAACGTCCATCGTCGGCAAGGCGTGACTAAGCAATTCCAACCGCTTCAGGGAAACAAATGaTAATCATGGCGTCCTGACGTCTTCGGCAGAGTTTTGTTATCCAGCGCTGAAGTATGCAGAAATGTGTTAGCCGGTGGACCTCTACAGCGCTTTATCTTCCGGTTTTATGATATTATCCACTGTTTTCATTCGAGCTATTAGaCGTGTTTCGACTCTGTCAGAATGAGTGATCCAGCTGTAAAGAGGGTAGTGAGCGATATCATTCGTTCTCCAGAAGACAAACGAGAGTATCGAGGACTTGAGTTTACTAATGGGCTGAAAGCCGTTCTCATCAGTGACCCCACCACTGACAAATCATCCGCCGCACTGGATGTACACATAGGTTCTTTGTCAGATCCCGAGAACATTTCAGGACTGGCCCACTTCTGTGAGCACATGCTGTTTCTGGGAACCAAGAAGTACCCCAAAGAGAACGAGTACAGCCAGTTCTTGAGTGAGCACGCCGGCAGCTCCAATGCCTTCACTAGTGGAGAGCACACCAATTACTACTTTGATGTATCCCATGAGCATCTACAAGGGGCTTTGGACAGATTTGCCCAGTTCTTTCTCTGTCCACTGTTTGATGAGAGCTGTAAGGACCGAGAGGTGAACGCAGTGGATTCAGAACATGAGAAGAATCTCATGAATGACGCATGGAGGCTGTTTCAATTGGAGAAAGCCACTGGGAACCCTAAACATCCTTTTAGCAAGTTTGGCACTGGCAATAAGTTAACCCTTGAGACAAGGCCATCTCAACAGGGCATTGATATCCGTGAGGAGCTGCTCAAGTTTCACTCCACTTATTATTCCTCTAACCTTATGGGGTTGTGTGTGCTGGGCAGAGAGTCACTGGATGATTTGACATCTATGGTTGTAAAGCTTTTTGGAGAGGTTGAGAACAAGAATGTCCCTCTCCCAGAATTCCCATCACACCCTTTCCAGGAAGAACACCTGAGGcaATTTTATAAAGTGGTGCCCATCAAGGACATTAGAAACTTGTATGTGACCTTCCCTATCCCAGACCTGCAGAAGTACTACAAGTCAAATCCAGGTCATTATCTAGGCCATCTGATTGGACATGAGGGTCCAGGGAGTCTTCTTTCTGAGCTCAAAGCTAAAGGATGGGTTAACACTCTAGTCGGAGGCCAGAAAGAAGGAGCCAGAGGATTTATGTTCTTCATTATTAATGTGGACTTGACAGAAGAGGGGCTGTTGCATGTCGAGGATATCATCTTCCACATGTTCCAGTATGTTCAGAAGCTGCGGACAGAGGGCCCTCAAGAGTGGGTCTTTCAAGAGTGTAAGGACTTGAACACTGTGGCTTTCCGATTTAAGGATAAGGAACGTCCTCGTGGATACACGTCTAAAGTGGCTGGATTATTGCATTACTATCCGCTGGAGGAAGTCTTGGCTGCTGAATACTTGCTGGAGGAGTTCAGGCCAGATTTGATCGAGATGGTGCTTGATAAACTAAGACCAGAGAATGTCAGggTTGCTGTTGTCTCTAAATCATTTGAAGGTCAGACAGACCGCACTGAGGAGTGGTACGGCACACAGTATAAACAGGAAGCTATTACTGATGATGCTATTAAGAAATGGCAAAATGCAGACCTTAATGGAAAGTTTAAACTGCCAATGAAGAACGAATTCATCCCGACAAAATTTGAGATTTATCCTCTAGAAAAGGATTCCCCATCTGTCCCTACTTTGATAAAGgaCACCGCAATGAGCAAAGTTTGGTTCAAGCAGGATGACAAGTTTTTCCTACCCAAGGCTTGTTTAAACTTTGAGTTTTTCAGCCCGTTTGCGTATGTGGACCCGTTGCATTGTAATATGGCGTATTTGTACCTTGAGCTGCTCAAGGATTCCCTGAACGAGTATGCATATGCAGCCGAGCTAGCAGGCCTGAACTATGACCTTCAAAATACCGTCTATGGGATGTATCTGTCAGTCAAGGGTTATAATGACAAGCAGCACATCCTGCTGAAGAAGATCATCGAGAAAATGGCCACCTTTGAGATCGATGAGAAGCGCTTTGATATCATTAAGGAAGCGtacatgAGGTCTCTAAATAACTTCCGCGCTGAGCAGCCTCACCAGCATGCCATGTATTACCTGCGACTGCTCATGACTGAGGTGGCCTGGACCAAAGACGAGCTCCGAGATGCTCTGGATGATGTGACGTTACTTCGTCTGAAGGCGTTCATACCGCAGCTGTTGTCAAGGTTACACATTGAAGCCCTGCTGCATGGCAACATCACCAAACAGTCTGCTCTGGGCATGATGCAGATGTTGGAGGACACTCTCATTGAGCACGCTCACACTAAACCCCTCCTGCCGAGTCAGCTTATTCGCTACAGGGAAGTGCAGGTACCTGACGGTGGTTGGTATGTTTACCAGCAGAGGAATGAAGTTCATAATAACTGTGGAATCGAGATTTACTATCAGACTGACATGCAAAACACCCATGAGAACATGCTGCTGGAGCTCTTCTGTCAGATCATCTCTGAGCCATGCTTCAACACGCTACGCACCAAAGAACAGCTGGGTTACATTGTGTTCAGCGGTCCCCGCAGGGCCAATGGAGTGCAGGGGCTGCGTTTCATCATCCAGTCTGAAAAAGCTCCTCACTACCTGGAGTCTCGGGTGGAGGCCTTCCTCAAGATGATGGAGAAAAGTGTGGATGAGATGGGAGAAGAAGCGTTTCAGAAACACATTCAGGCACTAGCTATTCGCCGCCTTGACAAACCTAAGAAGCTGGCGGCCGAATGTGCCAAGTACTGGGGAGAAATCATCTCTCAACAGTACAACTTTGACAGGGATAATATTGAAGTGGCTTACCTGAAGACACTGACAAAGGAACACATTATGCAGTTTTACAGGGACTTGTTGGCCATTGATGCCCCCAGAAGACACAAAGTGTCTGTGCATGTGCTGTCTAGAGAGATGGACTCCTGTCCACTGGTTGGAGAGTTTCCTGCTCAAAATGATGTCAATCTCGCTCCTGCTCCTTCACTTCCTCAGCCATCATTGGTTCAGGATATGACTGAGTTCAAAAGGAGTCTGCCGCTGTTCCCTCTCACCAAACCTCACATCAATTTCATGGCTGCCAAACTGTGACCAGCATCATTGGATTGTCAGAGACACCCAAACATATGGAGCCAGTAACaccgttgtgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaagcaggCAAGGCCACTACGGAGCCGCTTGCAACATTTTAGTTGTGTTCTGCATCAGACATGCAGACCCGATATCTCATAGATgcatagaaaacattcaatgtTTGTTTCATGTTGCTTCTGTCAGGAAATTTGTATCCCTATTTAATATAGGAATCACTCGCTGGCCACGACGACACTTTCTCATTGTtcagtttcatttcaaaatgctgTTTCATTTATACACCTGTTAAAACCACAAGAAACCGTTTGGAGAGGCTGTATTTTATCAAGATATGTCtctctttaaatgaaataactgGCCTTAAGATGATTTTAATCAGTGATCAGGTTTtctggcactttttttttcttaagtttaatttaaatcgATTATTCGCTTTGAGTTGTTTTTAGTTTCTGTGCATGTTGGCAGAGTTTTATCTTTAAGGATAGTGTTGTAAATGCAAGGTGGTTAACTTGATGGACTTTGATTTTACTTGCGGTTGAAGAAATAtcataataaacaattttaatatcatttcatTTGCTTATTTAAGTTACTTTTGTCCTTTTTGTAGGATTCCTAATATAACCGAAGCCCTGTTCATCTGACCTAAACTCGGTGTCATAGGTATTCATGAGTCGAATTTGTATTTGAGTTGTTTGTGAAAGCCTCACACAGGAATGTTTTACACAATTGAATGCAAGAGTTTatgcaccttttttttatttaacatgaataCGAATCACAAATGATGCAGATTGTTTTTCAGGTTGCTTAGTTTGATCGCCCATATACCGATATCCACGTGTGACACAACTGCATTTCAGGAGTTTTTGcaaaaaaccaactcaaaatcTCCTTTTTAACTGGGTTTGTTTTACTTCTGATGTCTTGACTTGTGATTTATGCACTCCTCACAAGCAATAATGTGACTTACAGGACCTATGACTAGTGTCTTAAACTCTACACTAGGTGTTTTCCTCGACGCTGTTTGAGCTTGGTTCAGAGAAACCGATTAGACAAGATCTAGGCTTGGTCTTTGCTCGGAAAACCCTCCTGTGACGTGTTTTGAAGGCTGTAATTTACCTGCGCTGATGCAGGAGCATCATGTCAAGTCTGTAATCCGTGTGTGTCCTcatctcagtgtgtgtgttagccTAGTCTCGGGTCAAGTCTTCACCATCACTTGTGTTTCTAGTGCTGAGATTTATTCTGGACTTACTCAGGCATATCAAATCAAATGTATGCTGCATTTTTTAGACACTTAACGACCATCCTACCACATCccttaaaataatgaatactgTTTCGTGCTCCTCAAAACTAACTGATATTAGCCTCTTAGATGAGTTCGGTTGTATCACTAAGATGGATATACTCAGGCATCTCACTTCATTGGTTTTAGTGGtcggtgtttttggtttttaaatttaaaggaatggttcataGATCATCCATCaaattttaaagtgcccctattacgGTGTTTCgaaatgagctttcatgcacAGCTCTGCGTGAATAAACATACtgcaaaagttttaaatctgaaagtgcgccaaagttattgtctctcaagagtcgactctgaatgaTTGAAAATGGTTTCTTGTTGTCTGCCCGCTTGTTACGGGCACAgacctgtgaaaaaaaaaaagccaattcaTTATTTGCTATTAGGTGCTGCGTTTGGAGCGTTAAAAGGTTTAGGactcctaaaaccaaaacacGGACCTTTCATAACCTGTAACAGGGCCACTTTaagtttagtcattttattggCTCTCACGGCGTTCCAGTCCTGTATGACGTTTTCTCGAAAGTGTTTGTTCTTGCAGTTTTCCGtgcaatgaaagtgaatggggacCATGCATGGCAAGCTCGAAAAATGGCATAAACAATTGTGCGCTATATTTCAAACCTATTAAAGCCATTTGATGGCTTTGTGACCGTGTTACCATTTAAAAACTTCAATAAATGAGTAGTAAAGCCACATGCACGAAGACATATTTAAGACtacataaaaatgactaaaaccttaaaattaaattgaagcctgaaaatgcaaaaacaaacagtagTTAAAAAGATTAGTAAACTACGTGATGGTGTATATAATCtgaaaactgaactgaaaattgtagctgttttaatgcaagtTCAGTTTTCGTCACCATTCAATCATATGGCTTCTtgaaatttatttgtattactgCACAGCCAGAAAGaccaaaaaaagtggaaaaaaaaaaaaatttcataatTCTCGTTCATAATGTTGCCGATCTGTAAACGGTTTAATGTTCCAAACCCCACCGACTTCCATTGTGCGGACgcaaatatttctcaaaatatttagtttcacAGAAACATCATACAggattgaaatgaaatgaaggtGAGTTAATGATGAaagtgtttatttctgtgtaatcagtcattttatttgGCTCTGGGTCACTGAATGCTATTATtttgtagagaaaaaaaaaaaagaaaagcagcttAGAAGTTCTGCtaaacattttttgtctttatatagagacaacaggtttggaatgacatgaggttgagtaaatgatagtattgtgtttattttgtggttGGTCGGTTGGGGGGGGgtgaacatattttaatttactttaaaatccAAAGATGCATTTCGCATGCAGTCTGAGCATTTGTTGCACCCCAAATCCCTTTAACCGTTCTAGAATGAGTTCTGTAGGTCAGTGACTGCAACAGATGCGTGTGGTTCTCAGCGTCTCCTGTAACCCGATGTCACGTGTGTTTTGCTCATACTGTGGTGAGCAGTAGGCAGAATATTAGAGTGTAAAATTTAGAAGAGCAGGATTTGAGTAACTCTGCGTCAGTAAAAGATGTTTCGTTCTTTCTAAATCCAGTCATGAAGTGGAAACGCTTGATATCTTATGTTTATTAGGTGGTTTTGAAGTGCATCTTGGGAATGTGTATCTGTGGGAGAGCTTTGTGTTTTATGACTATTAAACAATCGTATGAACTCA

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0046872 metal ion binding molecular_function
GO:0004222 metalloendopeptidase activity molecular_function

KEGG:

id description
K01408 IDE, ide; insulysin

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006252311.1 lncRNA upstream 67658 16361672 ~ 16381076 (+) True LOC122356350
TU139569 lncRNA downstream 47320 16516813 ~ 16518826 (+) False G94324
TU139619 lncRNA downstream 71692 16541185 ~ 16542938 (+) True G94361
TU139623 lncRNA downstream 88343 16557836 ~ 16558137 (+) True G94365
TU139677 lncRNA downstream 271974 16741467 ~ 16796842 (+) True G94397
TU139793 lncRNA downstream 416591 16886084 ~ 16925137 (+) True G94481
XM_043255807.1 mRNA upstream 16725 16422784 ~ 16432009 (+) True opn3
XM_043256130.1 mRNA upstream 58619 16381358 ~ 16390115 (+) True cdc42ep3
XM_043254967.1 mRNA upstream 116069 16327857 ~ 16332665 (+) True LOC122356348
XM_043255785.1 mRNA upstream 146639 16292761 ~ 16302095 (+) True polr1b
XM_043256057.1 mRNA upstream 477422 15968755 ~ 15971312 (+) True dkk1a
XM_043255676.1 mRNA downstream 19384 16488877 ~ 16515704 (+) False cpeb3
XM_043255672.1 mRNA downstream 19402 16488895 ~ 16515704 (+) True cpeb3
XM_043255674.1 mRNA downstream 19402 16488895 ~ 16515704 (+) False cpeb3
XM_043255678.1 mRNA downstream 19403 16488896 ~ 16515704 (+) False cpeb3
XM_043255679.1 mRNA downstream 19403 16488896 ~ 16515704 (+) False cpeb3
TU139427 other upstream 544385 15903946 ~ 15904349 (+) False nkx1.2la
TU139358 other upstream 571312 15873444 ~ 15877422 (+) True G94186
TU139356 other upstream 572056 15874271 ~ 15876678 (+) False G94186
XR_006252368.1 other upstream 578109 15864839 ~ 15870625 (+) False hps1
TU139570 other downstream 46334 16515827 ~ 16518826 (+) True G94324
TU139572 other downstream 46334 16515827 ~ 16516759 (+) False G94324
TU139571 other downstream 46374 16515867 ~ 16516759 (+) False G94324
TU139637 other downstream 128288 16597781 ~ 16605383 (+) True G94378
TU139910 other downstream 1090803 17560296 ~ 17575938 (+) False G94564

Expression Profile