RNA id: XM_043255748.1


Basic Information

Item Value
RNA id XM_043255748.1
length 2605
RNA type mRNA
GC content 0.39
exon number 9
gene id angpt2a
representative True

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 24043636 ~ 24057904 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCTTTCATTGGAGCAGATACAGGCGAGAAGAATTATCCAGCAGGAAGAGTTTAATTAGAGATCCTGTCTGGCTGGAAAGGTCTTTATGCTCCTCTATCCAAGCAGCGCTTTTCAAACAGAGGCCACGGTTCATGGGAGGAGTCTCAGTCCTTTCACAGAAGACTCTGTTAAGAAAACAGCCTGCTAAACTGATGAGGGATGAGTGCAAGCAGCCTGGGAGCAAGTGATACTCTATTAGTGCTTCTGTGACACTGTCTCCTCCTACTTTTGGTGGCATATAAGTGAAGCTCACAGACAGTGGTCTCAATGTAGACACGGAGACTCTgtggcttattttttttttacatcatccAGACCTTTAAATAAGGTACAAAGggagattgtttttttttttttttttttttttttagaacaaacATGCTGAACGCTGGGATATTATTACTACTAAGTTATTGTTTTAGTGTTGCGGAAGCATTTACAGGCAATTTAGATACAACAGGAAAGAAGCAGTACCAGATCCAGAATGGGGCATGTACCTACACCTTTCTGCTGCCACAACCACAGGACTGTGGAGGCCCTTCAAGCACCTACACCAACCAAGTGCAACGCGATGATCTGGTTGACTATGACAGCTCAATTCAAAGACTGGAACAACTAGAAACCAATATGGAGAACAACACGCAATGGCTGCAGAAGCTGGAGAACTACATCCAGGACAACCTCAAACAAGACATGGcccaaattcaaaataatgcGGTGCAAAACCACACAGTGACCATGATCAAGATTGGGACCAGCCTCCTAAATCAGACAGCAGAGCAAACCCGAAAAATCACTACTATTGAGGCACAGGTTATTAACCAAACAACTCGACTTGAACGTCAGCTTCTTGAGAACTCTATTTCAACCAGCAAACTGGAAAAAGAAATTCTACAACagataaatgaaatcaacaaacTCAATGAAAAAAACAGtgtTCTGGAGAAGCGAGTGGAGAACATAGAAGGAAAGAGAAATACTGAACTAGAAAACCTCAAAGAGGAAAAGGAACAGCTCGAAAAGCTGGTAGAAAAGCAGTCTAACATAATGAAAGAGATGGAGCAACAACTGCTCCGAACCTCCTCCGATAACTCTGCATTGAAGCAGCAACAGCAAGAACTAACAAATACAGTCAACTACCTAATCCACACAATCTCTCTGGGCAGCAATTCAATGATGCAGGACAACCCAGATCAGTACAATGACTGTGCCGCAGTCTTCAGTGCAGGGAACAAGGAAAGCGGAGTTTACTCATTGACGATACCCGATACAAAACATCAATTTAAGGCCTACTGTGACATGGAGACAGATGGAGGTGGATGGACAGTAATACAGAAGCGCTTTAACGGCCTTGTTGATTTTCATCAAACATGGAAAAATTACACATTGGGGTTTGGAGATATCTCAGGTGAACACTGGTTGGGGAATGAAATTATCTCTAAATTGACACAAGAAAAACAGTATGTGCTCAGGATACAACTAACAGACTGGGAGGGAAATAAGGCCTTTTCAAAATATGAGCAGTTTTCACTAGATGGAGAGAAGCAGAATTACAGGATACAACTCAACGGTTACAGTGGAACAGCAGGGAGAACAAGTAGTATGGGACAGCCAGGAAGTGATTTCAGTGCAAAAGACATAGACAACGACAAATGTGTTTGCAAATGCTCACAAATGCTTTCAGGAGGTTGGTGGTTTGATGCCTGTGGACCATCTAATCTCAATGGAGTATACTACCAGCAGGGGCAGAACACCAATCGGTTCAATGGTATTAAATGGTACTACTGGAAAGGTTCGGCATATTCACTAAAAGCCACAACTATGATGATAAGACCATCAAACTTCTGAGCCTCTACTTCTAAAGAACAATAATTATTGATGCCACTGCTTTTCTTATCCTGTAAGAAAAATGTTGGTGGCTTGAGCTTTATGCACCtctgataaataattattttttaagaacatcAAGCAAAGGCAGCTTTGTTTCTGTGTTAAATAGCTAATCAACTGAACATAAAGACGTGACCGACAAATTAAAACAGAGCTTCATCAATGGACAAGTTTTATTGAAATGGAAGTGTGAATACTCTCCTTTGATTGAAGACAGTAATTAAAGACTAACAGCAGTAAAGGGAACACAGCTGTAAACAATTACCTTGATGCTTCACAGAATTTCTAAAATCTATATATAgataattaaaattaactattattttcttattttatttgtaattaatatattgtaaataccaaattatttacagaaatgtatatttttcattgtaacCATGGTACAAgagttatttaaatgcataatgctAAAGACATTCTTTACATTTGTCTTACAAATTGTTATTGTATAAAGCTGTTGTTTACACATGGTTTAGTGCTTTTGACCTTCTTGTAGATTTCTTAACTGTGGGCATTTGTTGACAGCTGATCAGACTCCACGGAATTCCTTAAAAGTTTACTTTACCCAAATGGAAAATCTTCATGTTCCAAATTAAAATTGTCAATGTACTCACCTCCATGTCATTCTGAATCAATGacttcaattcattttttt

Function

GO: NA

KEGG:

id description
K05466 ANGPT2; angiopoietin 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU142315 lncRNA downstream 115576 23927331 ~ 23928060 (-) True G96265
TU142295 lncRNA downstream 501336 23538778 ~ 23542300 (-) True G96254
TU142211 lncRNA downstream 599853 23439277 ~ 23443783 (-) False si:ch211-130h14.4
TU142128 lncRNA downstream 865540 23176802 ~ 23178096 (-) True G96117
TU142099 lncRNA downstream 889141 23152205 ~ 23154495 (-) True G96108
TU142347 lncRNA upstream 12256 24070160 ~ 24070488 (-) True G96286
TU142361 lncRNA upstream 49529 24107433 ~ 24107818 (-) True G96295
TU142369 lncRNA upstream 192529 24250433 ~ 24250755 (-) True G96301
TU142371 lncRNA upstream 206764 24264668 ~ 24264917 (-) True G96303
TU142446 lncRNA upstream 216791 24274695 ~ 24282617 (-) True G96329
XM_043255964.1 mRNA downstream 48043 23633716 ~ 23995593 (-) True csmd1a
XM_043254854.1 mRNA downstream 523982 23513815 ~ 23519654 (-) False rnaset2
XM_043254853.1 mRNA downstream 523983 23513815 ~ 23519653 (-) True rnaset2
XM_043254855.1 mRNA downstream 524592 23513815 ~ 23519044 (-) False rnaset2
XM_043256259.1 mRNA downstream 537944 23465789 ~ 23505692 (-) True rps6ka2
XM_043254672.1 mRNA upstream 241031 24298935 ~ 24302415 (-) True LOC122356174
XM_043254701.1 mRNA upstream 253123 24311027 ~ 24313946 (-) True inaa
XM_043255979.1 mRNA upstream 269961 24327865 ~ 24341452 (-) False cnnm2a
XM_043255978.1 mRNA upstream 269961 24327865 ~ 24341447 (-) True cnnm2a
XM_043255981.1 mRNA upstream 284956 24342860 ~ 24344657 (-) False borcs7
TU142010 other downstream 1048037 22994663 ~ 22995599 (-) True G96053
TU141976 other downstream 1220377 22821981 ~ 22823259 (-) True G96036
TU141977 other downstream 1221122 22821981 ~ 22822514 (-) False G96036
TU141882 other downstream 1600350 22379092 ~ 22443286 (-) False LOC122356262
XR_006252429.1 other upstream 212410 24270314 ~ 24270449 (-) True LOC122357144
TU142459 other upstream 284957 24342861 ~ 24344630 (-) False borcs7
TU142467 other upstream 341219 24399123 ~ 24403644 (-) False fgf8a

Expression Profile