RNA id: XM_043255809.1


Basic Information

Item Value
RNA id XM_043255809.1
length 1897
RNA type mRNA
GC content 0.47
exon number 9
gene id fbxw4
representative True

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 24367927 ~ 24393887 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

aagaTATCAACAAAAGGGCATATAggtatattattataaagttacCAGAAACTGATGAGCTTGTGCGACTGTTCATGCATACAGCTGAATGAAAAGTAGGCTACCACAGAAAACCGGATGGATTTAAGTCACTGGCTCTAGTGGATCACGTGACTCCACTGGTTGTGATGGCTTCCTTCGCTTACTGTGACTACACGCTTTGAGAAAAACATGGGCTTCTGCGTATTCCTGCGTCAAATCGACGAGTGTCTTCTCAGTAATACCCTTCATATTAGTGGAGGCAGACACAGCGTGATAAAGAAAAGGGGAAAGGCGCTGATCTGGAGAAGACGCCGcgatgtttctgtttcagttacCCGAGGATGTGCTCTTTCTCGTCCTGTCCTATCTGGATCCCAGATCGCTCTGCCGCCTCTCTCAAGCGTGCAAGAGAAGCTACATGTTCATCTGCAGGGACGCTGTTTGGAGGAAAATAGCTAAAGACATTATTAACACTGGTTTGACCCGACAAGGAATAGATCTGTGCCCTTCTATTCCTCTTAAAGACAGAGTGAGGGTGTCTCACAACTGGATCCATGGAGTCTGTCGTAAAGAAgttcttttaaaatggaaaattaaCTTGTTGCCGTGGATACAGCTGGACTGTGATGTGCTGTATCTCTCTCAGGCTGCAAACATCAGTGCGTACCATCTGAGAGCTAAGGGGGGAAAGTTGCAGAACAATCGAGTGGCCCTGTTCTCGGGACACCAAGAAGACGTGTGCAGATTCActctgacagacacacaccttATCAGTGCAGGAGGCGATggtaaaataatcattcatgaCAGAGGAAGTGATTACTCTGTGGAGTATTATGGTCACAATCAGGAGGTGAACTGCATTGACTGTAAAGGGGGTGTGATAGTCAGTGGCTCCAGAGACAAGACCGCAAAGatttgGGCTCTGACTCCTGATCGATTTGGACAGTGCTTGCATACAATCCCCACATATGACAGAGTGTGGTCAGTGGCCATTAGCCCATCTCTATGCAACTTTGTGACAGGAACAGCCTGCTGTGAGAATTTTGCTCCTCTTCGCATCTGGGACACTGAAAGGTGTCACCTGGTGTCGTCTCTCGGGACAGAGTTTCGCCGTGGCGCAGGTGTGTTGGACATCGCCTATGAGTCTCCTTTCCAGCTCCTCACCTGTGGATACGATACTTTCATCCGCTACTGGGATTTACGCGTCTGTTCAAGGAAGTGCGTGATGGAGTGGGAGGAGCCTCATGACAGCGCTCTTTACTGTATAAAGACAGACAAGAATCACATGATTGCCAGCGGTTCATCATACTACGGAGTAGTCCGACTTTGGGACAAACGGCAAACCCGCTGTTTACAGATGTTCCAGTTGGCACCCACCACCAGCAGCCCAGTGTACAGCCTGTGCTTCAACACCACTCACCTATACGCTGCCCTGGCCTCTGTCCTCTACTCCCTTGACTTCAGAACTGCATCGCCCCAGTCCTGGAAATAACCATCCGTTTATGTTGCTTGAGACTTTAAGGCTCTTTTTTCATCTCCTCCAAGTTCTTAGTGATGGTCTTAAATGGGGAAGTAGCCGTCTTGCCTTTGGATGATCAGTGCAGCTAATGATACAGTTATGGCCTGGTGGATATTTTTTCCCTGTCACAGGCTCCTGAGAGCAAGCAGGGTTCACGACCTTCTGTGGCCCGAGTCTTAACGGACTTAACACATTGCCAGCGACCTCTGAGACgtctaaaacaaacactgctCAGAGCTGCCAACATCCACTGAGGGGATGTATGCTAAACCACAGCACATAGGATAATAGATATATTGTAactaaaagtatatttttccAACAATGAGCCAATTAaacgtgttttgttttctt

Function

GO: NA

KEGG:

id description
K10262 FBXW4, SHFM3; F-box and WD-40 domain protein 4

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU142461 lncRNA downstream 23297 24342749 ~ 24344630 (-) True borcs7
TU142460 lncRNA downstream 23297 24342861 ~ 24344630 (-) False borcs7
TU142446 lncRNA downstream 85310 24274695 ~ 24282617 (-) True G96329
TU142371 lncRNA downstream 103010 24264668 ~ 24264917 (-) True G96303
TU142369 lncRNA downstream 117172 24250433 ~ 24250755 (-) True G96301
TU142546 lncRNA upstream 212243 24606130 ~ 24606376 (-) True G96411
TU142551 lncRNA upstream 236666 24630553 ~ 24674087 (-) True G96415
TU142552 lncRNA upstream 237538 24631425 ~ 24675946 (-) False G96415
XR_006252418.1 lncRNA upstream 259040 24652927 ~ 24664925 (-) True LOC122357044
TU142568 lncRNA upstream 260894 24654781 ~ 24664886 (-) False LOC122357044
XM_043255382.1 mRNA downstream 6631 24350847 ~ 24361296 (-) False wbp1la
XM_043255383.1 mRNA downstream 9686 24350847 ~ 24358241 (-) True wbp1la
XM_043255981.1 mRNA downstream 23270 24342860 ~ 24344657 (-) False borcs7
XM_043255980.1 mRNA downstream 23270 24342860 ~ 24344657 (-) False borcs7
XM_043255979.1 mRNA downstream 26475 24327865 ~ 24341452 (-) False cnnm2a
XM_043254715.1 mRNA upstream 5239 24399126 ~ 24404715 (-) True fgf8a
XM_043255913.1 mRNA upstream 36133 24430020 ~ 24441333 (-) True slc2a15a
XM_043254739.1 mRNA upstream 209801 24603688 ~ 24620433 (-) True b3gat2
XM_043254555.1 mRNA upstream 273418 24667305 ~ 24672334 (-) False asrgl1
XM_043254554.1 mRNA upstream 273418 24667305 ~ 24672195 (-) True asrgl1
TU142459 other downstream 23297 24342861 ~ 24344630 (-) False borcs7
XR_006252429.1 other downstream 97478 24270314 ~ 24270449 (-) True LOC122357144
TU142010 other downstream 1372328 22994663 ~ 22995599 (-) True G96053
TU141976 other downstream 1544668 22821981 ~ 22823259 (-) True G96036
TU142467 other upstream 5236 24399123 ~ 24403644 (-) False fgf8a

Expression Profile