RNA id: XM_043255850.1


Basic Information

Item Value
RNA id XM_043255850.1
length 1325
RNA type mRNA
GC content 0.52
exon number 6
gene id qkib
representative True

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 3482958 ~ 3543676 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ACTCAGTGTGATCATGTGACGGGCTCGAGAGCGCAAGAGGAGCTGGTCGGTAACGGAGGACCGAATGCCAATCTCATTGAGAAAGCGCCTTTATTGCGCGTAAGAGACGGGAGGGACAGACGTTTCTAGTgctgcacacatacacagacaggCAAGACACAGGAAGCTCTGGGGAACTCGGGAAAAGGGTGCATTTTCGCCGCCTCAAGAGGAAGTTAAGGACAAATCTCTCgctaaaataaatcttaaaaggGGCACTGGGCACGCGGGAGTCGCCTTTGCCGGTAACTTGTGGGATTTATCGGGAATTGTTTCTGAAAGGAGATCTGGCTTCCCCCTCCGCAcgtttatatttcatttgattcatttaatttcatttcatctgCTGCCCTAAACAACTGTCATCTCCCGACTTGCCGTAGCCTATTGCAGCAGCGGATTGTGCGTAAAGACAGAGACAGCGAGCCTTTTCCGCGGACGAGCCGGGCACTTGCCTTCTTCACACGCGTTTTTTTGTactctatttattatttatacccaagcctttatttattttgggacTTTTTCCGTCTATTTTGGGGCGTCGGTGGTGATTCCTGTGGAATATGGTGGGGGAAATGGAAACGAAAGAGAAGCCGAAGCCGACCCCAGATTATCTGATGCAGCTCATGAACGATAAGAAACTGATGAGCAGTCTGCCCAACTTCTGCGGGATCTTCAACCACCTCGAACGGCTTCTCGACGAAGAGATCAGCAGGGTACGAAAGGACATGTACAACGACACGTTAAACGGCAGCACGGAGAAGAGAAGCTCCGAGCTCCCGGACGCCGTCGGCCCCATCGTTCAGCTCCAAGAGAAACTCTATGTGCCTGTTAAAGAATATCCTGACTTTAATTTTGTGGGCCGGATCTTGGGCCCGCGGGGGCTCACAGCCAAACAGCTGGAGGCAGAGACAGGATGTAAGATCATGGTGAGAGGGAAAGGCTCCATGAGGGACAAGAAGAAGGAGGAACAAAACCGAGGCAAACCCAACTGGGAGCACCTGAATGAGGACCTCCATGTGCTCATTACCGTGGAGGATGCCCAGAACCGGGCTGAGATCAAGCTTAAACGTGCAGTAGAGGAGGTTAACAAGCTACTCGTGCCTGCGATGACTAACTCCCAGATGGCCCACAGAGAGGCCGCCCCCTTCCTTATCAATCCCAACCCCGCTGCTGCTGTGTATGATGTCCAGCAGTACCCTCCCACATCCCAAGGGAGGCAGGAGAATGAAGGGCCCAGTGGTTTGTGGGAGGTTCCATCTGTTCCCTTCATGGCACAATAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU134020 lncRNA downstream 31545 3450994 ~ 3451413 (-) True G90505
TU134019 lncRNA downstream 32225 3450424 ~ 3450733 (-) True G90504
TU134012 lncRNA downstream 49484 3422753 ~ 3433474 (-) True timm23b
TU133983 lncRNA downstream 81892 3370165 ~ 3401066 (-) True G90482
TU133949 lncRNA downstream 197552 3283179 ~ 3285406 (-) False dlk2
XR_006252403.1 lncRNA upstream 24940 3568616 ~ 3578736 (-) True LOC122356977
TU134055 lncRNA upstream 167720 3711396 ~ 3712539 (-) True G90533
TU134057 lncRNA upstream 170248 3713924 ~ 3714846 (-) True G90535
TU134165 lncRNA upstream 385603 3929279 ~ 3930527 (-) True G90622
TU134166 lncRNA upstream 387140 3930816 ~ 3931096 (-) True G90623
XM_043255375.1 mRNA downstream 15901 3454742 ~ 3467057 (-) True LOC122356548
XM_043255508.1 mRNA downstream 47378 3426588 ~ 3435580 (-) False timm23b
XM_043255507.1 mRNA downstream 49420 3426588 ~ 3433538 (-) False timm23b
XM_043255506.1 mRNA downstream 49424 3426588 ~ 3433534 (-) False timm23b
XM_043256125.1 mRNA downstream 66026 3412331 ~ 3416932 (-) True yipf3
XM_043256122.1 mRNA upstream 218157 3761833 ~ 3764601 (-) True prph2b
XM_043255556.1 mRNA upstream 408921 3952597 ~ 3955955 (-) False wu:fj16a03
XM_043254600.1 mRNA upstream 472357 4016033 ~ 4022400 (-) True LOC122356122
XM_043255866.1 mRNA upstream 509067 4052743 ~ 4055413 (-) True hcar1-3
XM_043256321.1 mRNA upstream 518796 4062472 ~ 4067606 (-) True haao
TU133931 other downstream 461096 2990418 ~ 3021862 (-) True G90445
TU133704 other downstream 855801 2626328 ~ 2627157 (-) True G90311
TU133689 other downstream 897627 2584196 ~ 2585331 (-) True G90304
TU133469 other downstream 1237880 2151837 ~ 2245078 (-) True G90161
TU133318 other downstream 1791023 1684449 ~ 1691935 (-) True LOC122356758
XR_006252267.1 other upstream 1129290 4672966 ~ 4689168 (-) False LOC122356061
XR_006252269.1 other upstream 1129290 4672966 ~ 4689168 (-) False LOC122356061
XR_006252268.1 other upstream 1129290 4672966 ~ 4689168 (-) False LOC122356061
XR_006252266.1 other upstream 1129290 4672966 ~ 4689168 (-) False LOC122356061
XR_006252265.1 other upstream 1129290 4672966 ~ 4689168 (-) False LOC122356061

Expression Profile