RNA id: XM_043255978.1


Basic Information

Item Value
RNA id XM_043255978.1
length 5481
RNA type mRNA
GC content 0.47
exon number 8
gene id cnnm2a
representative True

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 24327865 ~ 24341452 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATgtctatatattattttaatatcgaTCACAGGCTGCTTCCTTATATGTGCTAACAGAAAttcaaacaaatacagttttaccAATAAGATTCAGAACAAGAAAGAGTAAGACAGATGCACACtaaacatctctctctccctctctctgtgtgtgtgtgtttatgagtgaAAGCCTTTACATTTTCACTGTTTTAGGTTTCAGCTCCAAGTCAtccaaaacataataaatgtaaacataatttaGTGGTTCTGTGAATGAATTAAGAACAGACTTGGACGTCTTCTGGAAAGTGACATAATGCATGAATGAAGTTTGAATGAAGTAGGCGAGTTCGTTTGTGTGGCAGAGAGACGCACAAGCCCTCGTAGAAAGCGAATCTTTTTAATCCTTGCGTcggtttttttatgcattccctTACGTATCATTTACCCCACTGCAATCGTTATACTGTTTTTCTCCGTTTTCAGAATTAACCCCGAAATGTCAATACGTTAATGCAAAGTATTGGCCAGTATTTTCAATGGTGACATACCGTTGGCCGTCGGTGACCACTCCCCCCTTTTGGGGACCGCTCGTTTTGATTGGTCTTTGGACACACCCACTGCCGAGTTTAAGCCCGATAGCCCCGCCTCTCCTCCGAAGTTCCGCGAGATGCCATTGGTCCTCATTTGCATACGCGACCGGATTGGGCAGAACGACCGTCCGTCATTAGGCATCTGTACTCGCAGCAGTTCACATAGAGCGTGCTGGTGTGTCATAGTGGTGCAGAGAGGCAGCGATACGCGGTGAGTAATGCCGGCCTTGTTGCTTGATGTCAGGACTGCTATAGAGAGGATGAAGGCGCACGCGGATTCCCTCTGACCTTGGCATCCTACATGCATTAACTAAAGTCTGCCCATTGTCAACATGGCAGAGCAATGGACCGCAGTGCCCACTTCTAATATGGCGGCGCTGAACCGGGCTAGATCATTGACTGTTATATTCTTAATTGTCAGCAGTTGTCTGATCAGTAGCATTGATGGCAAAGACGCGCCAGAAGAGACTGTCATCATTGGCCTCCGGCTCGAGGACACCGACGAGGTGTCGTTTATGGACAGAGGCTTTTTGCGCGTCAGCGAGCGCTCTCGTGTCAGGTTAAGGGTCTATGGGCAAAACATCAACAACGAGACGTGGTCCAAACTCGCCTTCACGGAACACAGCATCGGCAGCGCACCTGCGGAGAGCCAGAGCCCCGGAGACGCAGCTGCCTCGCATCCCTGCGGCATCCGATCCTCCGATATCATCATCCTTCCCACCGTGGAGGTAAACAGAAAGACATCTGGGATAATTGAAGTAGAGGTGAAACCTTTGCGAAAAACTGAGAAAAGCAAAGTGTATTACCTGTGCATCGCCACCGCCACACCTGGCGCGCAGGACGCGTGGTCCGAGAGCACCTGGATCTATCACGAGGGGCACGACACTAAAGTGCTCGTGGTAGAGGAGAAAAAGTTCCTTCTGCCTTTCTGGCTGCAGGTGATTTTTATTGCCATGTTGTTGTGTTTGTCCGGCATGTTCAGCGGGCTGAATCTGGGACTGATGGCGCTGGATCCCATGGAGCTTCGGATTGTCCAAAACTGCGGGACCGAGAAGGAGAAGAATTACGCGAAGAAGATCGAGCCAGTCCGAAGCCAAGGAAACTACCTTCTGTGCTCTTTGCTGCTGGGAAACGTCTTGGTCAACACCACTCTGACTATCCTGCTCGATGACATCGCGGGATCCGGGCTGATCGCTGTAGTGGTGTCCACTATAGGGATCGTGATTTTTGGGGAAATCGTGCCACAAGCCATCTGCTCCAGGCATGGGCTCGCCGTGGGCGCGAACACTATACTTCTCACTAAATTCTTTATGATCCTCACTTTCCCTGCGTCGTACCCTGTCAGTAAACTCCTGGACCACGTGCTGGGGCAGGAGATCGGCACTGTGTACAACAGGGAGAAACTTCTGGAGATGCTCAGGGTGACAGATCCGTACAATGACCTGGTCAAAGAGGAGCTGAACATCATCCAGGGCGCTCTGGAGCTCAGGACTAAAACCGTGGAGGACGTCATGACGCCTTTGCGAGACTGCTTCATGATCGCCGCCGATGCCATCCTGGACTTCAACACCATGTCTGAGATCATGGAGAGCGGCTACACGCGAATACCCGTGTACGAGGGCGAGAGGTGTCACATTGTGGACCTGCTGTTTGTCAAGGACTTGGCCTTCGTGGATCCAGACGATTGCACGCCGTTGAAAACCATCACCAAGTTCTACAGCCACCCTCTGCATTTTGTCTTCAATGACACCAAGCTGGATGCCATGCTCGAGGAGTTTAAAAAAGGTAAATCCCATCTGGCCATTGTCCAAAGAGTGAACAACGAAGGAGAAGGAGACCCATTCTATGAAGTTCTGGGCATCGTCACGCTAGAGGACGTCATTGAGGAAATCATCAAATCTGAGATTCTAGATGAGACGGACTTGTACACTGACAACAAGACGAAAAAGAGGATAGCTCACAGAGAGAGGAAACAGGACTTTTCCGCTTTCAAACCCACAGATAATGAGTTGAGCGTGAAAATATCACCACAGCTTCTTCTGGCCGCACTGCGTTTCCTGGCAACTGAGGTGGAGTCATTCAGTACGACTCAAATGTCAGAGAAAATCCTCCTGCGCTTGCTGAAACATCCTAACGTCATCCAGGAGCTTAAATATGACGACAAGAACAAGAAAATGTCAGAGCACTACCTCTTTCACCGCAACAAGCCTGTGGATTacttcatcctcctcttgcAGGGGAAGGTGGAGGTTGAGGCGGGAAAGGAGGGGATGAAGTTTGAAGCTGGTGCCTTCTCTTATTATGGAGTGCTGGCTTTAACATCTTCACCAGTTCCTCTCTCCTTGTCTCGAACCTTTGTGGTGAGCAGGGCAGAATCACTGGCAGGATCTCCAGAAAATAAGTCACCTCCACGGCCGTTCGGACTCAACCACTCGGACTCCCTGAACAGGAGTGACCGGATGGAGGCGGTCACTCCCACGCTGGGCAGCAGCAACAACCAGCTCAACTCCTTCCTGCAGGTCTACGTGCCAGACTATTCAGTGAGAGCCGCCTCTGACCTGCTCTACATCAAGGTGACCCGCCAGCAATATCAGAACGCCCTTATGGCATCTCGCATGGACAAGACGCCCCAGTCCACAGACAGCGAGTTCACCAAGATCGAGCTGACCTTCACAGAGCATCAGGATGGACCACTGGACGAGTCGGCCACTCTTTTAACCACCAACGCACACAAACCCAACCACACCGGTCACAACGACGGGGCGATTTAACCACCCTCAGCAAAGAGAGATGGCGAAAGAGCGCAAACGGCTCCGCTAGCCTCTCCCTTTCCACGTACTGAGCGAGAGGCCTTCTCGTACACTGGGCAGCTTCACTTCCTCTCATCATGGTCGATTTCAATGGGGAACGTACGCAAAGACTACAATGTGAAGGGCCGCATATCCCACAATGCATGCACTAATGACCTTAACACCTTTTGTAGGCAGCGGATCAGTCAGGGACCACCACATCATTCTCGCTCGCTCATTCGATCGAGGACGGACACACTTGAAACACACACTTTCACGTCGAAGGAGCAAGGTGACGACCCACACCACACCTCGACCAGACACCATACCAGAAGGACAAAGAAATAACGGTGCCTTTAGACAGCGCTCGGTTACTGTCAACAAACGAGGCCCCCGAGGGCCCCCGGGCCACACGGAGCTCTCCTAAATCTTCCATTCGACCCAGGAAGCCTGAGCAGATGCAGCCACAGATGAGATGTCAGCGACCGGGAGGCTTGTAAACACGGAGAATCGATGTCCCCAAGCCCTTCGAGAAAAGCCAGAATACATCTCAGCCTATCAGAAGAGGCCTCACGACCAAAGACATTTGGCATAGACAGGAGAAAACAGGCGGCATAACTGTGGGTCCTTCGCGAGAATCCGTTACAAAAACAGCAGCCTCGGACACGACACGCATAAGCAGGCGTTTGTCTGGACTGTGCCAAATAACAGACAACGATTTCTGCCCAGGTTAATCCACGTCACGCGCAGATGTGCTACGTACAGCGTTCGCAGTACAAAGAAAtcaaatgtgtttacatatgAGGGCCTTtttcatctatatatatatatatatatatatatttatatacatacattatatagatatatatatagagagagaaagagggaattTTTAATGTCAATCCTGATTGTGCTGAGGTACAGCGTCACCTATTTTAAGGTGGATAGAGTATACGTCTCATGACTGGTTCCATTTTTACCTACGTCGGACCACTCTTTATTAACGATACGTTTTTGATTTTTCAGTGCTTTTGTTGTAATCACGTAActcttaatttttaaaacaaacattttgtatgTCACAACTACCTTTCTTCAGATAGTTGCTAGCTGCGTTTAGGACCTCAAAGACACTATTTCAGGAACTTACACTGTAACTTATATCTCATCTTCCGATTACACTATTGCTcttttatcttattatttttttagcaaagcTATTCATGTAGGACTCAATGTCATGGGATTGTAAAAGAGGTACTTGATGATTTCCTGAattgaaaacagatgaaaaaggaaaataattcagcattaatgtatttatttggtttaaggTTACATTACCGCTCTTGATACAAAGGGGAACGAATCTCTGGCTGATGTTTTTATCCGctgactgtttgtttgtttttttgtttttttttaaatcagaaccTCCTGAGACGCTTCTGTCAGATGCGTAAAGCCGCTGGATTTAAGGACATTCACGTCTCAAGTGTTTATGTAGCAACCTCTCAGTGCAATAGTGCAACAGCTATGCAGGGACAATCATGACCAATTAATGTGCTCACAGGTAGGACAAAATATCCGAAATGTAAACTagcagaatttaatttaatgagacTGAGAGGTAGAGTAAATCTGTTAGATTAACACAACTACTGTTAAGGGGCTTGAGATGTTGAGTAGTGATTGTTGAACACTAACAAAGGCTTCGGTCAGCATTCCTGTTCTTCTGTTACATTGACCgcttattccatttttttttcacactgcgTTAAAGAGAAACGCCCGTTCATTTCACCTAAAGCATTCGGTGATGTCCTACAGATCAGATCAGTGTTTTCACATTGGATCGCCTGCCTTAGAAAAGAGGAAACGTCTTCAAAAATGTGGTGCTCTAACATGCGGTTTGAGTCTGTCATACACTGCTGCTATTTTCAATTTTGAATGTGTATAGAGATACTGTACAGTCATAAATCAGAGAGTACTATTGTATGCTTACATACTATAAACCAGACAATGCTATAtcagatttaaatataaacatatatatatatatatatatatatatacatatatatatgcagatgGAAATTGCtataataaaacag

Function

GO:

id name namespace
GO:0030554 adenyl nucleotide binding molecular_function

KEGG:

id description
K16302 CNNM; metal transporter CNNM

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU142446 lncRNA downstream 45248 24274695 ~ 24282617 (-) True G96329
TU142371 lncRNA downstream 62948 24264668 ~ 24264917 (-) True G96303
TU142369 lncRNA downstream 77110 24250433 ~ 24250755 (-) True G96301
TU142361 lncRNA downstream 220047 24107433 ~ 24107818 (-) True G96295
TU142347 lncRNA downstream 257377 24070160 ~ 24070488 (-) True G96286
TU142461 lncRNA upstream 1302 24342749 ~ 24344630 (-) True borcs7
TU142460 lncRNA upstream 1414 24342861 ~ 24344630 (-) False borcs7
TU142546 lncRNA upstream 264683 24606130 ~ 24606376 (-) True G96411
TU142551 lncRNA upstream 289106 24630553 ~ 24674087 (-) True G96415
TU142552 lncRNA upstream 289978 24631425 ~ 24675946 (-) False G96415
XM_043254701.1 mRNA downstream 13919 24311027 ~ 24313946 (-) True inaa
XM_043254672.1 mRNA downstream 25450 24298935 ~ 24302415 (-) True LOC122356174
XM_043255748.1 mRNA downstream 269961 24043636 ~ 24057904 (-) True angpt2a
XM_043255964.1 mRNA downstream 332272 23633716 ~ 23995593 (-) True csmd1a
XM_043254855.1 mRNA downstream 808821 23513815 ~ 23519044 (-) False rnaset2
XM_043255981.1 mRNA upstream 1413 24342860 ~ 24344657 (-) False borcs7
XM_043255980.1 mRNA upstream 1413 24342860 ~ 24344657 (-) False borcs7
XM_043255382.1 mRNA upstream 9400 24350847 ~ 24361296 (-) False wbp1la
XM_043255383.1 mRNA upstream 9400 24350847 ~ 24358241 (-) True wbp1la
XM_043255809.1 mRNA upstream 26480 24367927 ~ 24393887 (-) True fbxw4
XR_006252429.1 other downstream 57416 24270314 ~ 24270449 (-) True LOC122357144
TU142010 other downstream 1332266 22994663 ~ 22995599 (-) True G96053
TU141976 other downstream 1504606 22821981 ~ 22823259 (-) True G96036
TU141977 other downstream 1505351 22821981 ~ 22822514 (-) False G96036
TU141894 other downstream 1904996 22420936 ~ 22422869 (-) True G95972
TU142459 other upstream 1414 24342861 ~ 24344630 (-) False borcs7
TU142467 other upstream 57676 24399123 ~ 24403644 (-) False fgf8a

Expression Profile