RNA id: XM_043256325.1


Basic Information

Item Value
RNA id XM_043256325.1
length 1142
RNA type mRNA
GC content 0.46
exon number 6
gene id gsta.1
representative True

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 2478583 ~ 2480329 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCACCCGCGAGTTACGCAACACCTGCACACATAAAACTCACTGCTGCACACTTCGTCTTTACAGCAAGAAAAAGAGCTGAAGCCGAAGAAGATGTCTGAGAAAATTGTGTTGTATTACTTCAACGGCAGAGGGAAGATGGAGTCGGTCCGGTGGCTGCTGGCTGCGGCTGGAGTCCAGTTTGAGGAGGTGTTTTTGACCAAACGGGAGGATTATGAAAAACTGGTGAATGatgGAGTCCTGATGTTTCAGCAGGTGCCTTTGGTTGAAATAGACGGGATGCAACTTGTGCAGACAAAGGCTATCTTGAATTACGTCGCTGGAAAATACAATCTATACGGAAAAGACCTTAAGGAGCGGGCTATGATCGACATGTATTCAGAGGGAGTCAGTGACGTTATGGATATGATTATATTCAGTCTAGTCACGCCAcctgaagagaaaaagaagcagCTCAGTAATATAGAGCAAAAGGCCAAGGATCGCTTACTACCCGTCTTCGAAAAGCGTCTAGCTAGCTCTCAGTTCCTCGTGGGAAACCGGCTGAGCCGTGCCGATGTTCACCTTCTTGAAGTCACTCTTATGCTGCAGGAGATGTTCCCTGCAGTTCTTTCAGGCTTTCCCAAAGTCCAGGCATTTCAAGAGAAAATGAAGGCCTTGCCGACGATCAGCAAGTTCCTCCAGCCGGGCAGCGCCAGAAAACCTCCACCCGATGAAGCGTACGTGAAAACTGTGAAGGAGGTGCTGAGCCACATTTTCAAATAGAAGACCCGTGCTCTTTCCTTCACGGCAGTCACCTAACAGTGAACTCAAAACCATTAAATCAATCGCAAATCATTtacaaacttcatttttgaGACAAGATTAAAGCGGAGACTCTAAAATGGACAGATTTATTTGGAATGTGCAAGATACAGTTTGATGGGAAGAAGTGAAGATGCTGTGAAACGAATGATGAAACTGTCCGGTGGATGTTGAGAGAAAGGTCCCGGCGTGGCCTGTCCGTCAGCTTTTAGTAGATCAGAAGTCGCAAAACCATGAGGAGGCTGAAAGCAGAAGACCACCAGTGAGACTCTAATAATAATGCTATGTCTATGAATGTCTTTATTGGAGCAGATCAATAAAAACCGATTCATTAAATGAA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0004364 glutathione transferase activity molecular_function

KEGG:

id description
K00799 GST, gst; glutathione S-transferase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006252342.1 lncRNA downstream 35099 2442247 ~ 2443484 (-) True LOC122356497
TU133608 lncRNA downstream 50682 2427461 ~ 2427901 (-) True G90261
TU133539 lncRNA downstream 167454 2304214 ~ 2311129 (-) True G90211
TU133536 lncRNA downstream 180359 2287383 ~ 2298224 (-) True G90208
TU133535 lncRNA downstream 192374 2285542 ~ 2286209 (-) True G90207
TU133632 lncRNA upstream 1041 2481370 ~ 2481642 (-) True G90271
XR_006252293.1 lncRNA upstream 20206 2500535 ~ 2502458 (-) True LOC122356206
TU133683 lncRNA upstream 140907 2621236 ~ 2623909 (-) True G90300
TU133705 lncRNA upstream 144575 2624904 ~ 2625273 (-) True G90312
TU133877 lncRNA upstream 416709 2897038 ~ 2897468 (-) True G90408
XM_043255138.1 mRNA downstream 12317 2458880 ~ 2466266 (-) False LOC122356433
XM_043255137.1 mRNA downstream 12317 2458880 ~ 2466266 (-) True LOC122356433
XM_043255230.1 mRNA downstream 21520 2439206 ~ 2457063 (-) True LOC122356487
XM_043255117.1 mRNA downstream 331987 2093475 ~ 2146596 (-) True slit1a
XM_043255160.1 mRNA downstream 403805 2060300 ~ 2074778 (-) True nvl
XM_043255829.1 mRNA upstream 8098 2488427 ~ 2497421 (-) True LOC122356775
XM_043254726.1 mRNA upstream 126751 2607080 ~ 2608868 (-) True LOC122356217
XM_043254771.1 mRNA upstream 367844 2848173 ~ 2853384 (-) False si:zfos-1056e6.1
XM_043254770.1 mRNA upstream 367844 2848173 ~ 2852321 (-) True si:zfos-1056e6.1
XM_043254772.1 mRNA upstream 381679 2862008 ~ 2865825 (-) True LOC122356239
TU133469 other downstream 233505 2151837 ~ 2245078 (-) True G90161
TU133318 other downstream 786648 1684449 ~ 1691935 (-) True LOC122356758
TU133116 other downstream 921580 1556169 ~ 1557003 (-) False LOC122356439
TU132509 other downstream 2301263 123194 ~ 177320 (-) True G89543
TU132495 other downstream 2410707 67327 ~ 67876 (-) True G89537
TU133689 other upstream 103867 2584196 ~ 2585331 (-) True G90304
TU133704 other upstream 145999 2626328 ~ 2627157 (-) True G90311
TU133931 other upstream 510089 2990418 ~ 3021862 (-) True G90445
XR_006252267.1 other upstream 2192637 4672966 ~ 4689168 (-) False LOC122356061
XR_006252269.1 other upstream 2192637 4672966 ~ 4689168 (-) False LOC122356061

Expression Profile