RNA id: XR_006252293.1


Basic Information

Item Value
RNA id XR_006252293.1
length 456
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id LOC122356206
representative True

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 2500535 ~ 2502458 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCAAGAGCTTGAGTACATACGGCCATAATATACTAGTGCTGAAGAGCTTCCCTGCATTTTCCTATTCCAGTCAAGGTCATTTAGTcacataattattttagaattaaaatggaaaagttCAGAAGGCGGCAACCCCTTgATCTTGAAGTCTGCCAGTTTCTCCATGAGAGCGGCGTGTGTCCCGTAGCTCACAGAGCCCGCGCAGATCCACAGGACGATCAGGCCGAGTGCCCCGTCCATCTTCATGTGACCGTGAAGCAGGAATGACTTCTCCCTGTGAAGAGCAGCTCTGAGAGTCCAGACACACATTCCAGCTTCAGGGAAAAACAACCGCTTCCGGACTCACACTCACCCGCCAGACAAACACTGACCGCCTGTAATAACTCTTACTCGTAGTGCTGCGTTCATACCAgtaatgaatatatatgaaaataaatcaaataatttttattttta

Function

GO: NA

KEGG:

id description
ko00980 Metabolism of xenobiotics by cytochrome P450
ko00982 Drug metabolism - cytochrome P450
ko05204 Chemical carcinogenesis - DNA adducts

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU133632 lncRNA downstream 18893 2481370 ~ 2481642 (-) True G90271
XR_006252342.1 lncRNA downstream 57051 2442247 ~ 2443484 (-) True LOC122356497
TU133608 lncRNA downstream 72634 2427461 ~ 2427901 (-) True G90261
TU133539 lncRNA downstream 189406 2304214 ~ 2311129 (-) True G90211
TU133536 lncRNA downstream 202311 2287383 ~ 2298224 (-) True G90208
TU133683 lncRNA upstream 118778 2621236 ~ 2623909 (-) True G90300
TU133705 lncRNA upstream 122446 2624904 ~ 2625273 (-) True G90312
TU133877 lncRNA upstream 394580 2897038 ~ 2897468 (-) True G90408
TU133906 lncRNA upstream 441252 2943710 ~ 3194742 (-) False G90431
TU133908 lncRNA upstream 441252 2943710 ~ 3194742 (-) True G90431
XM_043255829.1 mRNA downstream 3114 2488427 ~ 2497421 (-) True LOC122356775
XM_043256325.1 mRNA downstream 20206 2478583 ~ 2480329 (-) True gsta.1
XM_043255138.1 mRNA downstream 34269 2458880 ~ 2466266 (-) False LOC122356433
XM_043255137.1 mRNA downstream 34269 2458880 ~ 2466266 (-) True LOC122356433
XM_043255230.1 mRNA downstream 43472 2439206 ~ 2457063 (-) True LOC122356487
XM_043254726.1 mRNA upstream 104622 2607080 ~ 2608868 (-) True LOC122356217
XM_043254771.1 mRNA upstream 345715 2848173 ~ 2853384 (-) False si:zfos-1056e6.1
XM_043254770.1 mRNA upstream 345715 2848173 ~ 2852321 (-) True si:zfos-1056e6.1
XM_043254772.1 mRNA upstream 359550 2862008 ~ 2865825 (-) True LOC122356239
XM_043254768.1 mRNA upstream 388929 2891387 ~ 2913514 (-) True LOC122356237
TU133469 other downstream 255457 2151837 ~ 2245078 (-) True G90161
TU133318 other downstream 808600 1684449 ~ 1691935 (-) True LOC122356758
TU133116 other downstream 943532 1556169 ~ 1557003 (-) False LOC122356439
TU132509 other downstream 2323215 123194 ~ 177320 (-) True G89543
TU132495 other downstream 2432659 67327 ~ 67876 (-) True G89537
TU133689 other upstream 81738 2584196 ~ 2585331 (-) True G90304
TU133704 other upstream 123870 2626328 ~ 2627157 (-) True G90311
TU133931 other upstream 487960 2990418 ~ 3021862 (-) True G90445
XR_006252267.1 other upstream 2170508 4672966 ~ 4689168 (-) False LOC122356061
XR_006252269.1 other upstream 2170508 4672966 ~ 4689168 (-) False LOC122356061

Expression Profile