Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_006252296.1 |
| length | 764 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 2 |
| gene id | LOC122356226 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056711.1 |
| NCBI id | CM032080.1 |
| chromosome length | 25085836 |
| location | 3246263 ~ 3247132 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:1902562 | H4 histone acetyltransferase complex | cellular_component |
| GO:0035267 | NuA4 histone acetyltransferase complex | cellular_component |
| GO:0043189 | H4/H2A histone acetyltransferase complex | cellular_component |
| GO:0032777 | Piccolo NuA4 histone acetyltransferase complex | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU133714 | lncRNA | upstream | 42244 | 2857325 ~ 3204019 (+) | True | G90319 |
| TU133743 | lncRNA | upstream | 44776 | 3199847 ~ 3201487 (+) | True | G90326 |
| XR_006252271.1 | lncRNA | upstream | 225372 | 3020068 ~ 3020891 (+) | True | LOC122356074 |
| TU133791 | lncRNA | upstream | 229043 | 3016794 ~ 3017220 (+) | True | G90339 |
| TU133785 | lncRNA | upstream | 235622 | 2982743 ~ 3010641 (+) | False | LOC122356072 |
| TU133829 | lncRNA | downstream | 68531 | 3315663 ~ 3315908 (+) | True | G90365 |
| TU133839 | lncRNA | downstream | 154832 | 3401964 ~ 3403754 (+) | True | G90373 |
| TU133844 | lncRNA | downstream | 203041 | 3450173 ~ 3450485 (+) | True | G90378 |
| TU133848 | lncRNA | downstream | 222315 | 3469447 ~ 3489791 (+) | True | G90381 |
| TU133855 | lncRNA | downstream | 254936 | 3502068 ~ 3543652 (+) | True | G90388 |
| XM_043255849.1 | mRNA | upstream | 154 | 3235043 ~ 3246109 (+) | True | znf318 |
| XM_043255847.1 | mRNA | upstream | 14840 | 3229113 ~ 3231423 (+) | True | LOC122356787 |
| XM_043255842.1 | mRNA | upstream | 18514 | 3209792 ~ 3227749 (+) | True | LOC122356783 |
| XM_043255841.1 | mRNA | upstream | 36510 | 3207411 ~ 3209753 (+) | True | LOC122356782 |
| XM_043254522.1 | mRNA | upstream | 190965 | 3053506 ~ 3055298 (+) | True | LOC122356070 |
| XM_043255234.1 | mRNA | downstream | 73297 | 3320429 ~ 3398358 (+) | False | tjap1 |
| XM_043255237.1 | mRNA | downstream | 73298 | 3320430 ~ 3398358 (+) | False | tjap1 |
| XM_043255236.1 | mRNA | downstream | 73299 | 3320431 ~ 3398358 (+) | False | tjap1 |
| XM_043255235.1 | mRNA | downstream | 74287 | 3321419 ~ 3398358 (+) | False | tjap1 |
| XM_043255232.1 | mRNA | downstream | 114455 | 3361587 ~ 3398358 (+) | True | tjap1 |
| TU133820 | other | upstream | 36531 | 3207776 ~ 3209732 (+) | False | LOC122356782 |
| TU133730 | other | upstream | 54150 | 3190326 ~ 3192113 (+) | True | G90324 |
| TU133737 | other | upstream | 56582 | 3187826 ~ 3189681 (+) | False | G90324 |
| TU133738 | other | upstream | 56582 | 3187826 ~ 3189681 (+) | False | G90324 |
| TU133813 | other | upstream | 66330 | 3179427 ~ 3179933 (+) | True | G90349 |
| TU133796 | other | downstream | 24193 | 3271325 ~ 3274372 (+) | True | G90343 |
| TU133812 | other | downstream | 30705 | 3277837 ~ 3280997 (+) | False | G90348 |
| TU133811 | other | downstream | 32070 | 3279202 ~ 3280997 (+) | True | G90348 |
| TU133843 | other | downstream | 202269 | 3449401 ~ 3450017 (+) | True | G90377 |
| XR_006252394.1 | other | downstream | 373274 | 3620406 ~ 3713763 (+) | False | prkn |
