RNA id: XR_006252429.1



Basic Information


Item Value
RNA id XR_006252429.1
length 136
RNA type snoRNA
GC content 0.35
exon number 1
gene id LOC122357144
representative True

Chromosome Information


Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 24270314 ~ 24270449 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AGCCTTCGTGTGTTGcccattcatttcatttgcataGTGAATGTGGTGTCAGAGATGGCGTGAATGAACTattgttgtgatttttaaatagaattcaGAGTATTTCCATTAATTAAGCTCTTCAATAAGAACATAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU142371 lncRNA downstream 5397 24264668 ~ 24264917 (-) True G96303
TU142369 lncRNA downstream 19559 24250433 ~ 24250755 (-) True G96301
TU142361 lncRNA downstream 162496 24107433 ~ 24107818 (-) True G96295
TU142347 lncRNA downstream 199826 24070160 ~ 24070488 (-) True G96286
TU142336 lncRNA downstream 202579 24042528 ~ 24067735 (-) True G96279
TU142446 lncRNA upstream 4246 24274695 ~ 24282617 (-) True G96329
TU142461 lncRNA upstream 72300 24342749 ~ 24344630 (-) True borcs7
TU142460 lncRNA upstream 72412 24342861 ~ 24344630 (-) False borcs7
TU142546 lncRNA upstream 335681 24606130 ~ 24606376 (-) True G96411
TU142551 lncRNA upstream 360104 24630553 ~ 24674087 (-) True G96415
XM_043255748.1 mRNA downstream 212410 24043636 ~ 24057904 (-) True angpt2a
XM_043255964.1 mRNA downstream 274721 23633716 ~ 23995593 (-) True csmd1a
XM_043254854.1 mRNA downstream 750660 23513815 ~ 23519654 (-) False rnaset2
XM_043254853.1 mRNA downstream 750661 23513815 ~ 23519653 (-) True rnaset2
XM_043254855.1 mRNA downstream 751270 23513815 ~ 23519044 (-) False rnaset2
XM_043254672.1 mRNA upstream 28486 24298935 ~ 24302415 (-) True LOC122356174
XM_043254701.1 mRNA upstream 40578 24311027 ~ 24313946 (-) True inaa
XM_043255979.1 mRNA upstream 57416 24327865 ~ 24341452 (-) False cnnm2a
XM_043255978.1 mRNA upstream 57416 24327865 ~ 24341447 (-) True cnnm2a
XM_043255981.1 mRNA upstream 72411 24342860 ~ 24344657 (-) False borcs7
TU142010 other downstream 1274715 22994663 ~ 22995599 (-) True G96053
TU141976 other downstream 1447055 22821981 ~ 22823259 (-) True G96036
TU141977 other downstream 1447800 22821981 ~ 22822514 (-) False G96036
TU141882 other downstream 1827028 22379092 ~ 22443286 (-) False LOC122356262
TU141887 other downstream 1831316 22371567 ~ 22438998 (-) True LOC122356262
TU142459 other upstream 72412 24342861 ~ 24344630 (-) False borcs7
TU142467 other upstream 128674 24399123 ~ 24403644 (-) False fgf8a