RNA id: unassigned_transcript_1927



Basic Information


Item Value
RNA id unassigned_transcript_1927
length 71
RNA type tRNA
GC content 0.62
exon number 1
gene id trnag-gcc_69
representative True

Chromosome Information


Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 7135072 ~ 7135142 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gcattggtggttcagtggtagaattctcgcctgccacgcgggaggcccgggttcgattcccggccaatgca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006252306.1 lncRNA downstream 89497 7017223 ~ 7045575 (-) True LOC122356287
TU135614 lncRNA downstream 255178 6879222 ~ 6879894 (-) True G91574
TU135536 lncRNA downstream 347465 6787267 ~ 6787607 (-) True G91513
XR_006252424.1 lncRNA downstream 431149 6693662 ~ 6703923 (-) True LOC122357105
TU135512 lncRNA downstream 447777 6687077 ~ 6687295 (-) True G91490
TU135810 lncRNA upstream 674718 7809860 ~ 7810104 (-) False si:dkey-191g9.7
TU135853 lncRNA upstream 843678 7978820 ~ 7980706 (-) True G91758
TU135856 lncRNA upstream 848804 7983946 ~ 7984316 (-) True G91760
TU135882 lncRNA upstream 862538 7997680 ~ 8041218 (-) True G91769
TU135912 lncRNA upstream 996101 8131243 ~ 8131848 (-) True G91796
XM_043255725.1 mRNA downstream 29868 7098370 ~ 7105204 (-) True LOC122356717
XM_043256324.1 mRNA downstream 63545 7056249 ~ 7071527 (-) True fam204a
XM_043255800.1 mRNA downstream 124959 6994152 ~ 7010113 (-) True LOC122356744
XM_043255493.1 mRNA downstream 263268 6867698 ~ 6871804 (-) True dennd10
XM_043254667.1 mRNA upstream 164441 7299583 ~ 7300598 (-) True apcs
XM_043256320.1 mRNA upstream 166039 7301181 ~ 7362010 (-) False gfra1a
XM_043256318.1 mRNA upstream 166039 7301181 ~ 7362009 (-) True gfra1a
XM_043256319.1 mRNA upstream 166039 7301181 ~ 7362003 (-) False gfra1a
XM_043256417.1 mRNA upstream 237302 7372444 ~ 7375162 (-) True si:ch1073-126c3.2
unassigned_transcript_1925 other downstream 3857 7131145 ~ 7131215 (-) True trnag-gcc_67
TU135441 other downstream 744357 6358201 ~ 6390715 (-) False sdccag8
TU135397 other downstream 909339 6225261 ~ 6225733 (-) False LOC122356805
XR_006252268.1 other downstream 2445904 4672966 ~ 4689168 (-) False LOC122356061
TU135889 other upstream 908423 8043565 ~ 8047901 (-) True G91775
TU136576 other upstream 1979951 9115093 ~ 9115551 (-) True G92267
TU136940 other upstream 3050619 10185761 ~ 10190510 (-) False LOC122356841
TU137394 other upstream 3789802 10924944 ~ 10935331 (-) True G92819
XR_006252282.1 other upstream 4065804 11200946 ~ 11218985 (-) False rassf4a