RNA id: TU155228


Basic Information

Item Value
RNA id TU155228
length 224
lncRNA type sense_over
GC content 0.42
exon number 1
gene id dusp14
representative False

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 9703426 ~ 9715689 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ggaaatgatagatgataCAAGCACCATACACTGAATGTAAGCCTTAACTTGACAAAAACTATAATCTGGTTcgtcaaatctgattggttaatcacaatgtttttccagggtcaacaaagatatTCATCAAGTTGAagtcagcaaaatcaggttctgctcCCACGCGGTGTCTGGACCCAAGCAGAAACAGGCCTCAAACCCATCCACTGGAGTGCCAGTACTTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU155226 lncRNA upstream 5017 9698074 ~ 9698409 (+) True G105101
TU155068 lncRNA upstream 30081 9669634 ~ 9673345 (+) False G105011
TU155049 lncRNA upstream 160224 9542366 ~ 9543202 (+) True G105002
TU155043 lncRNA upstream 182316 9520719 ~ 9521110 (+) False camkk1b
TU155005 lncRNA upstream 310857 9392141 ~ 9392569 (+) True G104974
TU155231 lncRNA downstream 2559 9706208 ~ 9706530 (+) True G105106
TU155240 lncRNA downstream 30554 9734203 ~ 9738624 (+) True G105112
TU155237 lncRNA downstream 60222 9763871 ~ 9803117 (+) True G105109
TU155277 lncRNA downstream 90099 9793748 ~ 9795843 (+) True G105141
TU155282 lncRNA downstream 110342 9813991 ~ 9815390 (+) True G105145
XM_043259026.1 mRNA upstream 6882 9679771 ~ 9696544 (+) False tada2a
XM_043259028.1 mRNA upstream 6882 9679810 ~ 9696544 (+) False tada2a
XM_043259025.1 mRNA upstream 6882 9679812 ~ 9696544 (+) True tada2a
XM_043259176.1 mRNA upstream 79454 9588789 ~ 9623972 (+) True traf4a
XM_043259938.1 mRNA upstream 116324 9578373 ~ 9587102 (+) False nek8
XM_043259029.1 mRNA downstream 4240 9707889 ~ 9715689 (+) True dusp14
XM_043259174.1 mRNA downstream 140756 9844405 ~ 9847385 (+) True mrm3a
XM_043259529.1 mRNA downstream 208007 9911656 ~ 9917112 (+) True p2rx8
XM_043259528.1 mRNA downstream 223619 9927268 ~ 9935456 (+) True flot2b
XM_043259654.1 mRNA downstream 245744 9949393 ~ 9965676 (+) True galnt17
TU155072 other upstream 30081 9669634 ~ 9673345 (+) True G105011
XR_006252680.1 other upstream 79454 9588789 ~ 9623972 (+) False traf4a
unassigned_transcript_2149 other upstream 128483 9574855 ~ 9574943 (+) True trnar-ucu_52
unassigned_transcript_2148 other upstream 128844 9574509 ~ 9574582 (+) True trnat-agu_66
XR_006252679.1 other upstream 151298 9549752 ~ 9552128 (+) True dhrs11b.1
TU155356 other downstream 390006 10093655 ~ 10110441 (+) False ypel2b
TU155413 other downstream 501190 10204839 ~ 10207452 (+) True G105248
XR_006252665.1 other downstream 649512 10353161 ~ 10390600 (+) False snx19b
TU155825 other downstream 1018323 10721972 ~ 10728395 (+) True G105513
TU156035 other downstream 1666987 11370636 ~ 11371927 (+) False LOC122358628

Expression Profile