RNA id: TU157828



Basic Information


Item Value
RNA id TU157828
length 217
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G106844
representative True

Chromosome Information


Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 15219383 ~ 15219599 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AGTGATTTTCCTTTTTGACTGACATCAGCAATCCATTTTTATTTCCCCCCCTTCTCCAACCAGCTGATTTTGTCTGACATGTTACGGCCACTATTAATGATCCAATATATTCCATAACATTAGGtgctgtcaaatatttttttctcattaaatatCCCATCTCACACAGAATCATGTCACGTTACAGAAGTGAAACGCGTTGCAAACGCTTCATCAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU157823 lncRNA upstream 10750 15208411 ~ 15208633 (+) True G106839
TU157822 lncRNA upstream 14317 15204722 ~ 15205066 (+) True G106838
TU157821 lncRNA upstream 14868 15204224 ~ 15204515 (+) True G106837
TU157817 lncRNA upstream 69019 15150007 ~ 15150364 (+) True G106833
TU157811 lncRNA upstream 133952 15085195 ~ 15085431 (+) True G106827
TU157829 lncRNA downstream 442 15220041 ~ 15220265 (+) True G106845
TU157832 lncRNA downstream 7954 15227553 ~ 15228173 (+) True G106848
TU157833 lncRNA downstream 8852 15228451 ~ 15228891 (+) True G106849
TU157834 lncRNA downstream 9986 15229585 ~ 15229789 (+) True G106850
TU157835 lncRNA downstream 10371 15229970 ~ 15230188 (+) True G106851
XM_043258374.1 mRNA upstream 291158 14912911 ~ 14928225 (+) True tbx4
XM_043258866.1 mRNA upstream 318830 14892675 ~ 14900553 (+) True tbx2b
XM_043258860.1 mRNA upstream 413405 14691579 ~ 14805978 (+) False bcas3
XM_043258942.1 mRNA downstream 31565 15251164 ~ 15254707 (+) True crybb1l3
XM_043258190.1 mRNA downstream 37327 15256926 ~ 15265743 (+) True unc119a
XM_043259815.1 mRNA downstream 62913 15282512 ~ 15287368 (+) True slc46a1
XM_043259813.1 mRNA downstream 74633 15294232 ~ 15299283 (+) True vtna
XM_043258678.1 mRNA downstream 110273 15329872 ~ 15367766 (+) True myo1cb
TU157786 other upstream 293868 14921135 ~ 14925515 (+) False tbx4
TU157784 other upstream 302500 14916505 ~ 14916883 (+) False tbx4
TU157171 other upstream 1302121 13916573 ~ 13917262 (+) True G106376
TU156912 other upstream 2372005 12842177 ~ 12847378 (+) False spa17
TU157969 other downstream 486914 15706513 ~ 15712439 (+) True G106937
TU157970 other downstream 486914 15706513 ~ 15710209 (+) False G106937
TU158204 other downstream 661515 15881114 ~ 15883510 (+) True G107107
XR_006252631.1 other downstream 785271 16004870 ~ 16043265 (+) True gdpd5b
XR_006252632.1 other downstream 785271 16004870 ~ 16043265 (+) False gdpd5b

Expression Profile