RNA id: TU157839



Basic Information


Item Value
RNA id TU157839
length 201
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G106855
representative True

Chromosome Information


Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 15235007 ~ 15235207 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GGACGTTTACTTTGCCACTGCATTCGATCCTTACAATAACGAGAGCAAAAATATGTGCATCAACGAGTGGAGATCAATGAGACCCCATGAATCCAATCAACACACCCCACCTGATCACCAATGAGCTTGGGATACTGTAGTAAAAGGATACAAGAGTACCTCTCTGGTTCAATGGCATCAGGTAGGGGGGTTTGGAGACCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU157837 lncRNA upstream 2778 15231991 ~ 15232229 (+) True G106853
TU157836 lncRNA upstream 3633 15231146 ~ 15231374 (+) True G106852
TU157835 lncRNA upstream 4819 15229970 ~ 15230188 (+) True G106851
TU157834 lncRNA upstream 5218 15229585 ~ 15229789 (+) True G106850
TU157833 lncRNA upstream 6116 15228451 ~ 15228891 (+) True G106849
TU157841 lncRNA downstream 1898 15237105 ~ 15237343 (+) True G106857
TU157842 lncRNA downstream 2311 15237518 ~ 15237725 (+) True G106858
TU157843 lncRNA downstream 3410 15238617 ~ 15238946 (+) True G106859
TU157844 lncRNA downstream 4176 15239383 ~ 15239712 (+) True G106860
TU157852 lncRNA downstream 10398 15245605 ~ 15245814 (+) True G106863
XM_043258374.1 mRNA upstream 306782 14912911 ~ 14928225 (+) True tbx4
XM_043258866.1 mRNA upstream 334454 14892675 ~ 14900553 (+) True tbx2b
XM_043258860.1 mRNA upstream 429029 14691579 ~ 14805978 (+) False bcas3
XM_043258942.1 mRNA downstream 15957 15251164 ~ 15254707 (+) True crybb1l3
XM_043258190.1 mRNA downstream 21719 15256926 ~ 15265743 (+) True unc119a
XM_043259815.1 mRNA downstream 47305 15282512 ~ 15287368 (+) True slc46a1
XM_043259813.1 mRNA downstream 59025 15294232 ~ 15299283 (+) True vtna
XM_043258678.1 mRNA downstream 94665 15329872 ~ 15367766 (+) True myo1cb
TU157786 other upstream 309492 14921135 ~ 14925515 (+) False tbx4
TU157784 other upstream 318124 14916505 ~ 14916883 (+) False tbx4
TU157171 other upstream 1317745 13916573 ~ 13917262 (+) True G106376
TU156912 other upstream 2387629 12842177 ~ 12847378 (+) False spa17
TU157969 other downstream 471306 15706513 ~ 15712439 (+) True G106937
TU157970 other downstream 471306 15706513 ~ 15710209 (+) False G106937
TU158204 other downstream 645907 15881114 ~ 15883510 (+) True G107107
XR_006252631.1 other downstream 769663 16004870 ~ 16043265 (+) True gdpd5b
XR_006252632.1 other downstream 769663 16004870 ~ 16043265 (+) False gdpd5b

Expression Profile