RNA id: TU157841



Basic Information


Item Value
RNA id TU157841
length 239
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G106857
representative True

Chromosome Information


Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 15237105 ~ 15237343 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TCGAGATCTAGAGTATTTCCTTCTCTTTGTTTAACCAAAGACGGCCTAATTATTAACCCGGCCTGCTGTTTGGTAATACATTATGTATTCTCGGGAGTGGGACAGATTAAAAATGAGAGGAAATACTGCACGTGTCATGCGTGTTTCAACAGTAAATTGTGATTAACAGTGATTctttcctctctcctcctccgtACAAACAGAAACGCACGAGATGGATTGATGCTGCACAGCTTTCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU157839 lncRNA upstream 1898 15235007 ~ 15235207 (+) True G106855
TU157837 lncRNA upstream 4876 15231991 ~ 15232229 (+) True G106853
TU157836 lncRNA upstream 5731 15231146 ~ 15231374 (+) True G106852
TU157835 lncRNA upstream 6917 15229970 ~ 15230188 (+) True G106851
TU157834 lncRNA upstream 7316 15229585 ~ 15229789 (+) True G106850
TU157842 lncRNA downstream 175 15237518 ~ 15237725 (+) True G106858
TU157843 lncRNA downstream 1274 15238617 ~ 15238946 (+) True G106859
TU157844 lncRNA downstream 2040 15239383 ~ 15239712 (+) True G106860
TU157852 lncRNA downstream 8262 15245605 ~ 15245814 (+) True G106863
TU157868 lncRNA downstream 52813 15290156 ~ 15290486 (+) True G106872
XM_043258374.1 mRNA upstream 308880 14912911 ~ 14928225 (+) True tbx4
XM_043258866.1 mRNA upstream 336552 14892675 ~ 14900553 (+) True tbx2b
XM_043258860.1 mRNA upstream 431127 14691579 ~ 14805978 (+) False bcas3
XM_043258942.1 mRNA downstream 13821 15251164 ~ 15254707 (+) True crybb1l3
XM_043258190.1 mRNA downstream 19583 15256926 ~ 15265743 (+) True unc119a
XM_043259815.1 mRNA downstream 45169 15282512 ~ 15287368 (+) True slc46a1
XM_043259813.1 mRNA downstream 56889 15294232 ~ 15299283 (+) True vtna
XM_043258678.1 mRNA downstream 92529 15329872 ~ 15367766 (+) True myo1cb
TU157786 other upstream 311590 14921135 ~ 14925515 (+) False tbx4
TU157784 other upstream 320222 14916505 ~ 14916883 (+) False tbx4
TU157171 other upstream 1319843 13916573 ~ 13917262 (+) True G106376
TU156912 other upstream 2389727 12842177 ~ 12847378 (+) False spa17
TU157969 other downstream 469170 15706513 ~ 15712439 (+) True G106937
TU157970 other downstream 469170 15706513 ~ 15710209 (+) False G106937
TU158204 other downstream 643771 15881114 ~ 15883510 (+) True G107107
XR_006252631.1 other downstream 767527 16004870 ~ 16043265 (+) True gdpd5b
XR_006252632.1 other downstream 767527 16004870 ~ 16043265 (+) False gdpd5b

Expression Profile