Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU159839 |
| length | 1333 |
| lncRNA type | sense_over |
| GC content | 0.36 |
| exon number | 2 |
| gene id | G108211 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056713.1 |
| NCBI id | CM032082.1 |
| chromosome length | 23709629 |
| location | 19998614 ~ 20055894 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0008537 | proteasome activator complex | cellular_component |
| id | description |
|---|---|
| ko04215 | Apoptosis - multiple species |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU159835 | lncRNA | upstream | 84171 | 19914149 ~ 19914443 (+) | True | G108207 |
| TU159771 | lncRNA | upstream | 262719 | 19731418 ~ 19735895 (+) | True | G108155 |
| TU159770 | lncRNA | upstream | 263380 | 19730739 ~ 19735234 (+) | True | G108154 |
| TU159737 | lncRNA | upstream | 308663 | 19689163 ~ 19689951 (+) | True | G108124 |
| TU159632 | lncRNA | upstream | 481140 | 19514981 ~ 19517474 (+) | False | G108058 |
| TU159874 | lncRNA | downstream | 85911 | 20141805 ~ 20142372 (+) | True | G108231 |
| TU159884 | lncRNA | downstream | 114875 | 20170769 ~ 20233185 (+) | True | G108240 |
| XR_006252691.1 | lncRNA | downstream | 152276 | 20208170 ~ 20208659 (+) | False | LOC122359185 |
| TU159916 | lncRNA | downstream | 152276 | 20208170 ~ 20215479 (+) | False | LOC122359185 |
| TU159930 | lncRNA | downstream | 183473 | 20239367 ~ 20294956 (+) | False | G108257 |
| XM_043258789.1 | mRNA | upstream | 1451 | 19955988 ~ 19997163 (+) | True | kirrel3l |
| XM_043258130.1 | mRNA | upstream | 224238 | 19747592 ~ 19774376 (+) | False | si:dkey-262k9.2 |
| XM_043258127.1 | mRNA | upstream | 224238 | 19752103 ~ 19774376 (+) | False | si:dkey-262k9.2 |
| XM_043258128.1 | mRNA | upstream | 224238 | 19756571 ~ 19774376 (+) | False | si:dkey-262k9.2 |
| XM_043258129.1 | mRNA | upstream | 224238 | 19756617 ~ 19774376 (+) | False | si:dkey-262k9.2 |
| XM_043259936.1 | mRNA | downstream | 18758 | 20074652 ~ 20086581 (+) | False | LOC122359578 |
| XM_043259935.1 | mRNA | downstream | 18758 | 20074652 ~ 20086581 (+) | False | LOC122359578 |
| XM_043259934.1 | mRNA | downstream | 18759 | 20074653 ~ 20086581 (+) | False | LOC122359578 |
| XM_043259932.1 | mRNA | downstream | 18759 | 20074653 ~ 20086581 (+) | False | LOC122359578 |
| XM_043259931.1 | mRNA | downstream | 18759 | 20074653 ~ 20086581 (+) | False | LOC122359578 |
| TU159761 | other | upstream | 224229 | 19721284 ~ 19774385 (+) | True | si:dkey-262k9.2 |
| TU159763 | other | upstream | 224229 | 19743371 ~ 19774385 (+) | False | si:dkey-262k9.2 |
| unassigned_transcript_2152 | other | upstream | 573425 | 19425117 ~ 19425189 (+) | True | trnav-aac_27 |
| XR_006252666.1 | other | upstream | 1002654 | 18993345 ~ 18995960 (+) | True | LOC122358990 |
| TU159893 | other | downstream | 128226 | 20184120 ~ 20186861 (+) | False | G108245 |
| TU159895 | other | downstream | 128226 | 20184120 ~ 20249972 (+) | False | G108245 |
| TU159862 | other | downstream | 133139 | 20189033 ~ 20191454 (+) | False | G108230 |
| TU159863 | other | downstream | 133139 | 20189033 ~ 20253742 (+) | False | G108230 |
| TU159872 | other | downstream | 133139 | 20189033 ~ 20254271 (+) | True | G108230 |
