Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU159884 |
| length | 300 |
| lncRNA type | read_through |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G108240 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056713.1 |
| NCBI id | CM032082.1 |
| chromosome length | 23709629 |
| location | 20170769 ~ 20233185 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0042594 | response to starvation | biological_process |
| GO:0031667 | response to nutrient levels | biological_process |
| GO:0009991 | response to extracellular stimulus | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU159874 | lncRNA | upstream | 28397 | 20141805 ~ 20142372 (+) | True | G108231 |
| TU159839 | lncRNA | upstream | 114875 | 19998614 ~ 20055894 (+) | True | G108211 |
| TU159846 | lncRNA | upstream | 154140 | 20014813 ~ 20016629 (+) | True | G108217 |
| TU159835 | lncRNA | upstream | 256326 | 19914149 ~ 19914443 (+) | True | G108207 |
| TU159771 | lncRNA | upstream | 434874 | 19731418 ~ 19735895 (+) | True | G108155 |
| TU159930 | lncRNA | downstream | 6182 | 20239367 ~ 20294956 (+) | False | G108257 |
| TU159932 | lncRNA | downstream | 6182 | 20239367 ~ 20294956 (+) | False | G108257 |
| TU159934 | lncRNA | downstream | 8830 | 20242015 ~ 20294956 (+) | True | G108257 |
| TU159926 | lncRNA | downstream | 64203 | 20297388 ~ 20302209 (+) | True | G108256 |
| TU160083 | lncRNA | downstream | 87696 | 20320881 ~ 20321946 (+) | True | G108337 |
| XM_043258936.1 | mRNA | upstream | 20952 | 20146188 ~ 20149817 (+) | True | igflr1 |
| XM_043258933.1 | mRNA | upstream | 29643 | 20126733 ~ 20141126 (+) | False | zbtb32 |
| XM_043258934.1 | mRNA | upstream | 29643 | 20127238 ~ 20141126 (+) | True | zbtb32 |
| XM_043258229.1 | mRNA | upstream | 64201 | 20104530 ~ 20106568 (+) | True | LOC122358429 |
| XM_043258231.1 | mRNA | upstream | 68665 | 20100720 ~ 20102104 (+) | True | LOC122358430 |
| XM_043258685.1 | mRNA | downstream | 13993 | 20247178 ~ 20249733 (+) | True | LOC122358796 |
| XM_043258684.1 | mRNA | downstream | 18807 | 20251992 ~ 20253736 (+) | True | LOC122358795 |
| XM_043258683.1 | mRNA | downstream | 28542 | 20261727 ~ 20267188 (+) | True | LOC122358794 |
| XM_043259831.1 | mRNA | downstream | 84361 | 20317546 ~ 20334995 (+) | True | LOC122359506 |
| XM_043259833.1 | mRNA | downstream | 84361 | 20317546 ~ 20334671 (+) | False | LOC122359506 |
| TU159761 | other | upstream | 396384 | 19721284 ~ 19774385 (+) | True | si:dkey-262k9.2 |
| TU159763 | other | upstream | 396384 | 19743371 ~ 19774385 (+) | False | si:dkey-262k9.2 |
| unassigned_transcript_2152 | other | upstream | 745580 | 19425117 ~ 19425189 (+) | True | trnav-aac_27 |
| XR_006252666.1 | other | upstream | 1174809 | 18993345 ~ 18995960 (+) | True | LOC122358990 |
| TU159894 | other | downstream | 14017 | 20247202 ~ 20249972 (+) | True | G108245 |
| TU160236 | other | downstream | 978625 | 21211810 ~ 21214493 (+) | True | G108431 |
| unassigned_transcript_2153 | other | downstream | 1019557 | 21252742 ~ 21252815 (+) | True | trnai-aau_69 |
| unassigned_transcript_2155 | other | downstream | 1020292 | 21253477 ~ 21253548 (+) | True | trnaw-cca_2 |
| unassigned_transcript_2157 | other | downstream | 1021749 | 21254934 ~ 21255005 (+) | True | trnag-ucc_4 |
