Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU160678 |
| length | 1205 |
| lncRNA type | read_through |
| GC content | 0.59 |
| exon number | 2 |
| gene id | G108721 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056713.1 |
| NCBI id | CM032082.1 |
| chromosome length | 23709629 |
| location | 22265832 ~ 22323620 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0070013 | intracellular organelle lumen | cellular_component |
| GO:0031974 | membrane-enclosed lumen | cellular_component |
| GO:0043233 | organelle lumen | cellular_component |
| id | description |
|---|---|
| ko03013 | Nucleocytoplasmic transport |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU160659 | lncRNA | upstream | 87202 | 22177392 ~ 22178630 (+) | True | G108713 |
| TU160590 | lncRNA | upstream | 228994 | 22028437 ~ 22036838 (+) | True | G108654 |
| TU160588 | lncRNA | upstream | 228994 | 22030624 ~ 22036838 (+) | False | G108654 |
| TU160589 | lncRNA | upstream | 228994 | 22030624 ~ 22036838 (+) | False | G108654 |
| TU160575 | lncRNA | upstream | 239523 | 22025798 ~ 22026309 (+) | True | G108648 |
| TU160685 | lncRNA | downstream | 17112 | 22340732 ~ 22355913 (+) | True | G108723 |
| XR_006252647.1 | lncRNA | downstream | 22831 | 22346451 ~ 22349061 (+) | False | LOC122358849 |
| TU160689 | lncRNA | downstream | 23284 | 22346904 ~ 22349630 (+) | True | LOC122358849 |
| TU160702 | lncRNA | downstream | 68063 | 22391683 ~ 22446892 (+) | True | G108736 |
| TU160727 | lncRNA | downstream | 178151 | 22501771 ~ 22510032 (+) | False | G108743 |
| XM_043258716.1 | mRNA | upstream | 60731 | 22183548 ~ 22205101 (+) | True | scaf4b |
| XM_043258742.1 | mRNA | upstream | 91290 | 22167114 ~ 22174542 (+) | True | sgpp2 |
| XM_043258732.1 | mRNA | upstream | 200238 | 22055580 ~ 22065594 (+) | True | pxylp1 |
| XM_043258731.1 | mRNA | upstream | 200242 | 22051590 ~ 22065590 (+) | False | pxylp1 |
| XM_043258551.1 | mRNA | upstream | 251525 | 21842663 ~ 22014307 (+) | True | clstn2b |
| XM_043258698.1 | mRNA | downstream | 36418 | 22360038 ~ 22443692 (+) | True | slc8a2b |
| XM_043258719.1 | mRNA | downstream | 123974 | 22447594 ~ 22471189 (+) | True | acsl3a |
| XM_043258718.1 | mRNA | downstream | 123974 | 22447594 ~ 22471189 (+) | False | acsl3a |
| XM_043258764.1 | mRNA | downstream | 150384 | 22474004 ~ 22475711 (+) | True | kcne4 |
| XM_043258721.1 | mRNA | downstream | 166264 | 22489884 ~ 22493619 (+) | True | scg2a |
| TU160427 | other | upstream | 528145 | 21736680 ~ 21737687 (+) | True | G108573 |
| TU160426 | other | upstream | 530114 | 21735014 ~ 21735718 (+) | True | G108572 |
| TU160425 | other | upstream | 532725 | 21731981 ~ 21733107 (+) | True | G108571 |
| TU160418 | other | upstream | 539658 | 21724555 ~ 21726174 (+) | False | LOC122358705 |
| unassigned_transcript_2157 | other | upstream | 1010827 | 21254934 ~ 21255005 (+) | True | trnag-ucc_4 |
| TU160996 | other | downstream | 452029 | 22775649 ~ 22777725 (+) | True | G108951 |
| TU161070 | other | downstream | 625520 | 22949140 ~ 22953513 (+) | True | G108990 |
| TU161085 | other | downstream | 632127 | 22955747 ~ 22959370 (+) | False | msantd4 |
| TU161296 | other | downstream | 940556 | 23264176 ~ 23271291 (+) | True | G109132 |
| XR_006252725.1 | other | downstream | 1069135 | 23392755 ~ 23393038 (+) | True | LOC122359600 |
