Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043258322.1 |
| length | 748 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 2 |
| gene id | sst1.1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056713.1 |
| NCBI id | CM032082.1 |
| chromosome length | 23709629 |
| location | 19595005 ~ 19596303 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0005576 | extracellular region | cellular_component |
| GO:0005179 | hormone activity | molecular_function |
| id | description |
|---|---|
| K05237 | SST; somatostatin |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU159627 | lncRNA | upstream | 59158 | 19488226 ~ 19535847 (+) | True | G108055 |
| TU159632 | lncRNA | upstream | 77531 | 19514981 ~ 19517474 (+) | False | G108058 |
| TU159633 | lncRNA | upstream | 77531 | 19514981 ~ 19517474 (+) | True | G108058 |
| TU159523 | lncRNA | upstream | 367623 | 19222740 ~ 19227382 (+) | True | G108011 |
| TU159501 | lncRNA | upstream | 373953 | 19171887 ~ 19221052 (+) | True | G107996 |
| TU159737 | lncRNA | downstream | 92860 | 19689163 ~ 19689951 (+) | True | G108124 |
| TU159770 | lncRNA | downstream | 134436 | 19730739 ~ 19735234 (+) | True | G108154 |
| TU159771 | lncRNA | downstream | 135115 | 19731418 ~ 19735895 (+) | True | G108155 |
| TU159835 | lncRNA | downstream | 317846 | 19914149 ~ 19914443 (+) | True | G108207 |
| TU159839 | lncRNA | downstream | 402311 | 19998614 ~ 20055894 (+) | True | G108211 |
| XM_043259433.1 | mRNA | upstream | 12990 | 19580539 ~ 19582015 (+) | True | sst1.2 |
| XM_043259002.1 | mRNA | upstream | 16145 | 19550700 ~ 19578860 (+) | True | col4a3 |
| XM_043258254.1 | mRNA | upstream | 80523 | 19510346 ~ 19514482 (+) | True | rhbdd1 |
| XM_043259863.1 | mRNA | upstream | 125584 | 19434054 ~ 19469421 (+) | True | nyap2a |
| XM_043258367.1 | mRNA | upstream | 324097 | 19230638 ~ 19270908 (+) | True | megf6 |
| XM_043259817.1 | mRNA | downstream | 10861 | 19607164 ~ 19617602 (+) | True | masp1 |
| XM_043259818.1 | mRNA | downstream | 10861 | 19607164 ~ 19617602 (+) | False | masp1 |
| XM_043259819.1 | mRNA | downstream | 10861 | 19607164 ~ 19617602 (+) | False | masp1 |
| XM_043259820.1 | mRNA | downstream | 10861 | 19607164 ~ 19617602 (+) | False | masp1 |
| XM_043259821.1 | mRNA | downstream | 10861 | 19607164 ~ 19613737 (+) | False | masp1 |
| unassigned_transcript_2152 | other | upstream | 169816 | 19425117 ~ 19425189 (+) | True | trnav-aac_27 |
| XR_006252666.1 | other | upstream | 599045 | 18993345 ~ 18995960 (+) | True | LOC122358990 |
| XR_006252667.1 | other | upstream | 599045 | 18993345 ~ 18995960 (+) | False | LOC122358990 |
| TU159167 | other | upstream | 751150 | 18842276 ~ 18843855 (+) | True | G107777 |
| TU159161 | other | upstream | 799023 | 18794080 ~ 18795982 (+) | True | si:dkey-30e9.6 |
| TU159761 | other | downstream | 124981 | 19721284 ~ 19774385 (+) | True | si:dkey-262k9.2 |
| TU159763 | other | downstream | 147068 | 19743371 ~ 19774385 (+) | False | si:dkey-262k9.2 |
| TU159893 | other | downstream | 587817 | 20184120 ~ 20186861 (+) | False | G108245 |
| TU159895 | other | downstream | 587817 | 20184120 ~ 20249972 (+) | False | G108245 |
| TU159862 | other | downstream | 592730 | 20189033 ~ 20191454 (+) | False | G108230 |
