Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043259567.1 |
| length | 1014 |
| RNA type | mRNA |
| GC content | 0.34 |
| exon number | 1 |
| gene id | LOC122359258 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056713.1 |
| NCBI id | CM032082.1 |
| chromosome length | 23709629 |
| location | 17239332 ~ 17240345 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0007608 | sensory perception of smell | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| GO:0004984 | olfactory receptor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU158696 | lncRNA | upstream | 38395 | 17200408 ~ 17200937 (+) | True | G107443 |
| TU158686 | lncRNA | upstream | 39719 | 17198455 ~ 17199613 (+) | True | G107440 |
| TU158688 | lncRNA | upstream | 39719 | 17198753 ~ 17199613 (+) | False | G107440 |
| TU158683 | lncRNA | upstream | 41002 | 17196154 ~ 17198330 (+) | True | G107438 |
| TU158681 | lncRNA | upstream | 43447 | 17195503 ~ 17195885 (+) | True | G107437 |
| TU158701 | lncRNA | downstream | 69000 | 17309345 ~ 17314661 (+) | True | G107447 |
| TU158706 | lncRNA | downstream | 213949 | 17454294 ~ 17457686 (+) | True | G107450 |
| TU158729 | lncRNA | downstream | 239503 | 17479848 ~ 17480048 (+) | True | G107468 |
| TU158739 | lncRNA | downstream | 325848 | 17566193 ~ 17566876 (+) | True | G107477 |
| TU158831 | lncRNA | downstream | 569988 | 17810333 ~ 17811203 (+) | False | trim3a |
| XM_043259550.1 | mRNA | upstream | 5725 | 17232591 ~ 17233607 (+) | True | LOC122359245 |
| XM_043259557.1 | mRNA | upstream | 9190 | 17229126 ~ 17230142 (+) | True | LOC122359253 |
| XM_043258350.1 | mRNA | upstream | 12238 | 17226111 ~ 17227094 (+) | True | LOC122358512 |
| XM_043258528.1 | mRNA | upstream | 27803 | 17210540 ~ 17211529 (+) | True | LOC122358664 |
| XM_043259662.1 | mRNA | upstream | 70617 | 17167765 ~ 17168715 (+) | True | LOC122359375 |
| XM_043259716.1 | mRNA | downstream | 12051 | 17252396 ~ 17253358 (+) | True | LOC122359423 |
| XM_043259729.1 | mRNA | downstream | 18528 | 17258873 ~ 17259838 (+) | True | LOC122359433 |
| XM_043259538.1 | mRNA | downstream | 21050 | 17261395 ~ 17262358 (+) | True | LOC122359229 |
| XM_043258177.1 | mRNA | downstream | 55654 | 17295999 ~ 17296934 (+) | True | LOC122358385 |
| XM_043258531.1 | mRNA | downstream | 128753 | 17369098 ~ 17370108 (+) | True | LOC122358671 |
| TU158422 | other | upstream | 725172 | 16513320 ~ 16514160 (+) | False | lyrm9 |
| TU158282 | other | upstream | 1002991 | 16089757 ~ 16236341 (+) | True | G107148 |
| XR_006252631.1 | other | upstream | 1196067 | 16004870 ~ 16043265 (+) | True | gdpd5b |
| XR_006252632.1 | other | upstream | 1196067 | 16004870 ~ 16043265 (+) | False | gdpd5b |
| TU158204 | other | upstream | 1355822 | 15881114 ~ 15883510 (+) | True | G107107 |
| TU158844 | other | downstream | 591727 | 17832072 ~ 18116953 (+) | True | G107558 |
| TU158847 | other | downstream | 619566 | 17859911 ~ 17860653 (+) | False | G107558 |
| TU158878 | other | downstream | 804672 | 18045017 ~ 18046904 (+) | True | G107574 |
| TU158879 | other | downstream | 804672 | 18045017 ~ 18046034 (+) | False | G107574 |
| TU159142 | other | downstream | 1515998 | 18756343 ~ 18758836 (+) | True | G107756 |
