Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043259583.1 |
| length | 1014 |
| RNA type | mRNA |
| GC content | 0.34 |
| exon number | 1 |
| gene id | LOC122359275 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056713.1 |
| NCBI id | CM032082.1 |
| chromosome length | 23709629 |
| location | 17400734 ~ 17401747 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0007608 | sensory perception of smell | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| GO:0004984 | olfactory receptor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU158701 | lncRNA | upstream | 86073 | 17309345 ~ 17314661 (+) | True | G107447 |
| TU158696 | lncRNA | upstream | 199797 | 17200408 ~ 17200937 (+) | True | G107443 |
| TU158686 | lncRNA | upstream | 201121 | 17198455 ~ 17199613 (+) | True | G107440 |
| TU158688 | lncRNA | upstream | 201121 | 17198753 ~ 17199613 (+) | False | G107440 |
| TU158683 | lncRNA | upstream | 202404 | 17196154 ~ 17198330 (+) | True | G107438 |
| TU158706 | lncRNA | downstream | 52547 | 17454294 ~ 17457686 (+) | True | G107450 |
| TU158729 | lncRNA | downstream | 78101 | 17479848 ~ 17480048 (+) | True | G107468 |
| TU158739 | lncRNA | downstream | 164446 | 17566193 ~ 17566876 (+) | True | G107477 |
| TU158831 | lncRNA | downstream | 408586 | 17810333 ~ 17811203 (+) | False | trim3a |
| TU158832 | lncRNA | downstream | 414385 | 17816132 ~ 17816825 (+) | True | G107547 |
| XM_043259582.1 | mRNA | upstream | 5582 | 17394137 ~ 17395152 (+) | True | LOC122359274 |
| XM_043259581.1 | mRNA | upstream | 12694 | 17387024 ~ 17388040 (+) | True | LOC122359272 |
| XM_043258532.1 | mRNA | upstream | 26581 | 17373143 ~ 17374153 (+) | True | LOC122358673 |
| XM_043258531.1 | mRNA | upstream | 30626 | 17369098 ~ 17370108 (+) | True | LOC122358671 |
| XM_043258177.1 | mRNA | upstream | 103800 | 17295999 ~ 17296934 (+) | True | LOC122358385 |
| XM_043259799.1 | mRNA | downstream | 12272 | 17414019 ~ 17414981 (+) | True | LOC122359481 |
| XM_043259575.1 | mRNA | downstream | 22764 | 17424511 ~ 17425472 (+) | True | LOC122359267 |
| XM_043259760.1 | mRNA | downstream | 27434 | 17429181 ~ 17430131 (+) | True | LOC122359453 |
| XM_043258533.1 | mRNA | downstream | 30504 | 17432251 ~ 17433240 (+) | True | LOC122358674 |
| XM_043258534.1 | mRNA | downstream | 32905 | 17434652 ~ 17435599 (+) | True | LOC122358675 |
| TU158422 | other | upstream | 886574 | 16513320 ~ 16514160 (+) | False | lyrm9 |
| TU158282 | other | upstream | 1164393 | 16089757 ~ 16236341 (+) | True | G107148 |
| XR_006252631.1 | other | upstream | 1357469 | 16004870 ~ 16043265 (+) | True | gdpd5b |
| XR_006252632.1 | other | upstream | 1357469 | 16004870 ~ 16043265 (+) | False | gdpd5b |
| TU158204 | other | upstream | 1517224 | 15881114 ~ 15883510 (+) | True | G107107 |
| TU158844 | other | downstream | 430325 | 17832072 ~ 18116953 (+) | True | G107558 |
| TU158847 | other | downstream | 458164 | 17859911 ~ 17860653 (+) | False | G107558 |
| TU158878 | other | downstream | 643270 | 18045017 ~ 18046904 (+) | True | G107574 |
| TU158879 | other | downstream | 643270 | 18045017 ~ 18046034 (+) | False | G107574 |
| TU159142 | other | downstream | 1354596 | 18756343 ~ 18758836 (+) | True | G107756 |
