RNA id: XM_043259795.1


Basic Information

Item Value
RNA id XM_043259795.1
length 2726
RNA type mRNA
GC content 0.46
exon number 8
gene id ankk1
representative True

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 12727956 ~ 12733428 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

aatgacagcAGCTAATTCCAGTGTACAGGATTCTTTCAGAGATGGCAGCCTGGAGAgatttactcattttaaaaaagatgagTTTGAAAGTGACTGGGAGAAACTGGCCGAACGCAAGTTTGGTCGTGTCTATAAAGTGAAGGTTAAGGTCTGGCGGGAAACTTGTGCTCTAAAGACAACGACCAATGATTACAGGAACATGACACATATGTCTAAAATTGGAAGACTGAAGTTCAGTTATTTAATCTCCATTTATGGAATAAGCAAAGATCCTCCTGGTTTAGTGATGGAATATATGAGAAAGGGATCCTTGGACAACCTCCTCAGCAGTCATTTCTTAATGTGGCCTAAGAAGTTCCAAATGATCCATGAGATGACGATGGGCATGAATTTTCTGCACAGCATGAAACCACCCATTCTTCATTTGAACTTGAAACCAGCCAACATTCTTCTTGATGATCATCTGCACGTGAAGGTTTCAGATTTTGGCCTCATTAAATGGGAGGAGTTTTCTGGTAAGACAGAGTTTATTGAACACCTGACAACTCGAGAGAACATAAACTATGTGCCTCCAGAGACCTTTACCCAGAATCCTGAACCACCTGGAACAAAGTATGATGTTTACGGTATTTCTATTATCATGTGGGAAATTCTAACTCAGCAGCGTGCATATCAAGGTCTGAATATGACAGAAATATTAATCAGAGTGTCATCTGGCAAAAGGCCTGGTATAGAGAAGATCGCTGAAGACAAGCCCCCTGAGTGCGAGGATATGATTGGTGTCATGCAGCAATGTTGGGACCAAAACTGCAGCCGGAGACCGGCTTTCTCTGAGACCGTTCAGTTGACTGAAGTCCTTAGTGAAGTCCTAAAAATCCCAGACACGAATGCAAGAGGTGAGATAAGAAAGCGCCTAACTGAACAGGTATGGAACCCAAAGAAAATAGCTGACTCCTCAGATGATTCTAGCGTTCAGTCTCTGCTTGTAAAGAAAGACTTTGAGAGCTTTAAGAAAGTTCTTCGAAAAGAGCACATGACTATGGTCTTTCGAGACAACAACTCTCTCCTCCATCACACCGTGGCAAGCGGGGACACAGAAAGCGTGCAGATGGTCCTGAATCTAGGTGCCATGGTGAATTGCCAGAGTGTAAAAGGCTACACGCCACTCATCGTCGCAGTTCTGCACAAGTTTTACGAGATCTGCAGCTTGTTGACAGACTGTGGGGCTGACGTCAATCTCGGCGATGGCGACCAGTGGACTGCTTTGCATTTTGCCGTGCAGGCTGGCGACGACAGAGCCGTGCGCCTTTTATTAGACAATAAGGCGCGAGTCGATGCCAAGGAGAAGGATGGGTGGACGCCGTTGCATCTCGCTGCTCAAAACGGCCACGAGCACATTGTGAGAATCCTGCTCCGGCGTCTGGATGCTGTAGATGAGCAAGAGCGCCAGTCTGGCCGTACCCCGCTTCACATGGCTTGCATTTATGGCCATGTGAACATCGTCAACCTCTTGCTCAAAAACGGAGCTGACGTTAACAAACCAGATGACCTTCAATCCACTTCCCTACACTTGGTGGCAGACGAGGGCCATTTCAGGGTGGCCCGTTTGCTGGTTAATAATGGGGCTAATGTGAAAGCAGTCGATAAGCAAAGCTACAGTCCTCTGCATTTTGCCGCTCTAAAGGGTTACACAGGGATCTGCAGACTCCTGTTGAGTAAAGGAGCCGACCCCAATATCAGAACCTATCAGAATTGGACAGCCATGCATCTTGCAGCCCTAAAAGGCCATCCAGAGACCGTCCTCATGTTGGAGGAGCACCACGGCTCAGTCAACATTCAAGGGAAAGATGGTTGGACTCCTCTGCACCTTGCTTGCCATCATGGACAGGAGGAGGTGGTTACGGTGCTGCTAACAGCAGGTGCTGACCCCAGCCTGGCCGAGGAGAATGGCTGGACACCCCTCCACCTAGCCTGTAACAGTAGCTGCTTCCCCAGCGTTCTGCAGCTGATATCTCACCAAGCCAATGTGAACGCCCAGAATAACAGCCAGTCCACGCCGCTGCATTTAGCCGTCCAGCTCAGCAACATCCCAATCATCAAAGCCCTGCTGATGAATAATGCACAACGGGACATGCAGGACTCGAAAGGATGTACCGCCTTAACCTTGGCTCAACGGTGCAACAATACAGAAGCCTTGGAGCTACTGAAAAGCTAGCACACCGGTGGAGATCCTGGCAGAGAGCGAGCCGTGTTTGGTGACAGATAACTCCACCATTAGAGGGAGTGCAGCATTGATTTCCGCTATCGATTTCCTTCCTCCGGCAAAGCCTGTTCTTATAAACAGTCttgctgttgtttgtgttttaaattccTAGAATTTAACGCCTTTGTTTGGGTTTGGTTAAGAGCTCAGGTGTGTTCGCGGAATGGAAGTGTTATGAATGAAGGATTTTAAGACTAGCAGGATGTTGTGGAAGTCAACATAAAATTGAAATTGAGTCAGTTTTGTTATCTTGAATAATTCATCAGAGCATGTTATTCCTAAGAAgacaattgtttgtttttgtaaaatttattcaaaaaataataacttcacTGAAATTCCTTGCTATATCTGTTTAGTCACTTACATTGCACAGGCGGttaaataatgtgcattgtaTAATGTAAGGTATAATTTACATACAAATTCAAATCTAATTAAAGTCTTAATTTattcatcctca

Function

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function

KEGG:

id description
K16289 ANKK1; ankyrin repeat and protein kinase domain-containing protein 1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006252655.1 lncRNA upstream 146154 12580364 ~ 12581802 (+) True LOC122358874
TU156557 lncRNA upstream 188514 12538531 ~ 12539442 (+) True G105987
TU156455 lncRNA upstream 346243 12366246 ~ 12381713 (+) False G105910
TU156456 lncRNA upstream 346243 12376679 ~ 12381713 (+) True G105910
TU156457 lncRNA upstream 361797 12363615 ~ 12366159 (+) True G105911
TU156842 lncRNA downstream 4623 12738051 ~ 12741077 (+) True G106161
TU156845 lncRNA downstream 4623 12738051 ~ 12741077 (+) False G106161
TU156859 lncRNA downstream 38367 12771795 ~ 12772070 (+) True G106171
TU156833 lncRNA downstream 40029 12773457 ~ 12780375 (+) True G106157
TU156914 lncRNA downstream 108749 12842177 ~ 12848414 (+) False spa17
XM_043259792.1 mRNA upstream 1683 12718060 ~ 12726273 (+) True LOC122359478
XM_043259794.1 mRNA upstream 1683 12722034 ~ 12726273 (+) False LOC122359478
XM_043259793.1 mRNA upstream 4669 12718060 ~ 12723287 (+) False LOC122359478
XM_043258366.1 mRNA upstream 11472 12703450 ~ 12716484 (+) True ttc12
XM_043258222.1 mRNA upstream 26151 12680273 ~ 12701805 (+) False si:dkey-103g5.4
XM_043259875.1 mRNA downstream 104154 12837582 ~ 12847386 (+) True spa17
XM_043259874.1 mRNA downstream 119428 12852856 ~ 12858500 (+) True hepacama
XM_043258325.1 mRNA downstream 128350 12861778 ~ 12868653 (+) True pde9ac
XM_043258326.1 mRNA downstream 128350 12861778 ~ 12868653 (+) False pde9ac
XM_043259754.1 mRNA downstream 149589 12883017 ~ 12896981 (+) True oafa
unassigned_transcript_2151 other upstream 907324 11820561 ~ 11820632 (+) True trnap-cgg_29
TU156035 other upstream 1356029 11370636 ~ 11371927 (+) False LOC122358628
TU155825 other upstream 1999561 10721972 ~ 10728395 (+) True G105513
XR_006252665.1 other upstream 2337356 10353161 ~ 10390600 (+) False snx19b
TU155413 other upstream 2520504 10204839 ~ 10207452 (+) True G105248
TU156910 other downstream 108749 12842177 ~ 12847378 (+) False spa17
TU156912 other downstream 108749 12842177 ~ 12847378 (+) False spa17
TU156913 other downstream 108749 12842177 ~ 12847378 (+) False spa17
TU157171 other downstream 1183145 13916573 ~ 13917262 (+) True G106376
TU157784 other downstream 2183077 14916505 ~ 14916883 (+) False tbx4

Expression Profile