RNA id: unassigned_transcript_2153


Basic Information

Item Value
RNA id unassigned_transcript_2153
length 74
RNA type tRNA
GC content 0.59
exon number 1
gene id trnai-aau_69
representative True

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 21252742 ~ 21252815 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ggccggttagctcagttggttagagcgtggtgctaataacgccaaggtcgcgggttcgatCCCCGTACTGGCCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU160232 lncRNA upstream 50233 21201387 ~ 21202509 (+) True G108427
TU160223 lncRNA upstream 62369 21072081 ~ 21190373 (+) True G108418
TU160192 lncRNA upstream 402827 20848722 ~ 20849915 (+) True G108394
XR_006252696.1 lncRNA upstream 414164 20833895 ~ 20838578 (+) False LOC122359263
TU160196 lncRNA upstream 414176 20833670 ~ 20838566 (+) False LOC122359263
TU160400 lncRNA downstream 363841 21616656 ~ 21617193 (+) True G108553
TU160403 lncRNA downstream 378514 21631329 ~ 21908852 (+) True G108555
TU160408 lncRNA downstream 381386 21634201 ~ 21911355 (+) True G108560
TU160411 lncRNA downstream 389768 21642583 ~ 21920410 (+) True G108561
TU160422 lncRNA downstream 474245 21727060 ~ 21727570 (+) True G108569
XM_043258636.1 mRNA upstream 1322 21226152 ~ 21251420 (+) True ngef
XM_043259545.1 mRNA upstream 42637 21202849 ~ 21210105 (+) True itm2ca
XM_043259855.1 mRNA upstream 51524 21193051 ~ 21201218 (+) True cab39
XM_043259050.1 mRNA upstream 424827 20521888 ~ 20827915 (+) True robo2
XM_043258192.1 mRNA downstream 2368 21255183 ~ 21263444 (+) True efhd1
XM_043259808.1 mRNA downstream 32572 21285387 ~ 21295902 (+) True gal3st2
XM_043259418.1 mRNA downstream 167268 21420083 ~ 21554540 (+) True fat3a
XM_043259419.1 mRNA downstream 167268 21420083 ~ 21554540 (+) False fat3a
XM_043259421.1 mRNA downstream 167268 21420083 ~ 21509028 (+) False fat3a
TU160236 other upstream 38249 21211810 ~ 21214493 (+) True G108431
TU159872 other upstream 998471 20189033 ~ 20254271 (+) True G108230
TU159863 other upstream 999000 20189033 ~ 20253742 (+) False G108230
TU159895 other upstream 1002770 20184120 ~ 20249972 (+) False G108245
TU159894 other upstream 1002770 20247202 ~ 20249972 (+) True G108245
unassigned_transcript_2155 other downstream 662 21253477 ~ 21253548 (+) True trnaw-cca_2
unassigned_transcript_2157 other downstream 2119 21254934 ~ 21255005 (+) True trnag-ucc_4
TU160418 other downstream 471740 21724555 ~ 21726174 (+) False LOC122358705
TU160425 other downstream 479166 21731981 ~ 21733107 (+) True G108571
TU160426 other downstream 482199 21735014 ~ 21735718 (+) True G108572

Expression Profile